RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 SEZ6Q53EL9 994 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 CD300LGQ6UXG3 332 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.95■□□□□ 0.3
MRPS28-209ENST00000522987 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 GPR65Q8IYL9 337 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 KIFAP3Q92845 792 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 FGF13Q92913 245 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 DDX27Q96GQ7 796 aaKnown RBP16.95■□□□□ 0.3
MRPS28-209ENST00000522987 PLIN2Q99541 437 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 LLPHQ9BRT6 129 aaKnown RBP16.95■□□□□ 0.3
MRPS28-209ENST00000522987 RUSC1Q9BVN2 902 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 DNMT3BQ9UBC3 853 aaKnown RBP16.95■□□□□ 0.3
MRPS28-209ENST00000522987 CDH7Q9ULB5 785 aa16.95■□□□□ 0.3
MRPS28-209ENST00000522987 XYLBO75191 536 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 HNRNPA1P09651 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
MRPS28-209ENST00000522987 FGFR3P22607 806 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 NPTX2P47972 431 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 EFNA5P52803 228 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 ELAVL2Q12926 359 aaKnown RBP16.94■□□□□ 0.3
MRPS28-209ENST00000522987 SNW1Q13573 536 aaKnown RBP16.94■□□□□ 0.3
MRPS28-209ENST00000522987 IL17AQ16552 155 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 TAS1R3Q7RTX0 852 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 DAW1Q8N136 415 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 NXPE3Q969Y0 559 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 ZBTB45Q96K62 511 aaPredicted RBP16.94■□□□□ 0.3
MRPS28-209ENST00000522987 MTRRQ9UBK8 725 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 TICRRQ7Z2Z1 1910 aa16.94■□□□□ 0.3
MRPS28-209ENST00000522987 SMIM28A0A1B0GU29 152 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 SLC16A4O15374 487 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 PAPLNO95428 1278 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 CD72P21854 359 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 YARSP54577 528 aaKnown RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 HMGN5P82970 282 aaKnown RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 ORC2Q13416 577 aaPredicted RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 RAB33AQ14088 237 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 UPP1Q16831 310 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 PABPC1LQ4VXU2 614 aaKnown RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 MCRS1Q96EZ8 462 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 SNX27Q96L92 541 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 ZMAT2Q96NC0 199 aaKnown RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 ACO2Q99798 780 aaKnown RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 TCHPQ9BT92 498 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 CCDC94Q9BW85 323 aaPredicted RBP16.93■□□□□ 0.3
MRPS28-209ENST00000522987 KMT5AQ9NQR1 393 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 TNFSF13BQ9Y275 285 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 PHLPP2Q6ZVD8 1323 aa16.93■□□□□ 0.3
MRPS28-209ENST00000522987 C1RP00736 705 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 GLULP15104 373 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 GRM5P41594 1212 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 MAPK7Q13164 816 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 DMP1Q13316 513 aaPredicted RBP16.92■□□□□ 0.3
MRPS28-209ENST00000522987 MCTP1Q6DN14 999 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 PDXDC1Q6P996 788 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 NPAS3Q8IXF0 933 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 ZSCAN31Q96LW9 406 aaPredicted RBP16.92■□□□□ 0.3
MRPS28-209ENST00000522987 KIF2CQ99661 725 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 ANKFY1Q9P2R3 1169 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 DNM3Q9UQ16 869 aa16.92■□□□□ 0.3
MRPS28-209ENST00000522987 MTF2Q9Y483 593 aaPredicted RBP16.92■□□□□ 0.3
MRPS28-209ENST00000522987 TMEM189-UBE2V1I3L0A0 370 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 PODXLO00592 558 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 MUTP22033 750 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 ROR1Q01973 937 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
MRPS28-209ENST00000522987 SPAG1Q07617 926 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 UBXN2BQ14CS0 331 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 SLC5A9Q2M3M2 681 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 VARS2Q5ST30 1063 aaKnown RBP16.91■□□□□ 0.3
MRPS28-209ENST00000522987 KRT79Q5XKE5 535 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 RINT1Q6NUQ1 792 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 POTEHQ6S545 545 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 IGSF22Q8N9C0 903 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 PJA1Q8NG27 643 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 MMTAG2Q9BU76 263 aaKnown RBP16.91■□□□□ 0.3
MRPS28-209ENST00000522987 MRPL4Q9BYD3 311 aaKnown RBP16.91■□□□□ 0.3
MRPS28-209ENST00000522987 PLA2G2FQ9BZM2 168 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 SLC2A4RGQ9NR83 387 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 DLGAP2Q9P1A6 1054 aa16.91■□□□□ 0.3
MRPS28-209ENST00000522987 MRPS23Q9Y3D9 190 aaKnown RBP16.91■□□□□ 0.3
MRPS28-209ENST00000522987 TCHHQ07283 1943 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 NPHP3-ACAD11A0A0J9YXS1 232 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 PRRG1O14668 218 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 MEFVO15553 781 aaPredicted RBP16.9■□□□□ 0.3
MRPS28-209ENST00000522987 RHOP08100 348 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 CEBPBP17676 345 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 HOXA9P31269 272 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 PHLDB3Q6NSJ2 640 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 MTSS1LQ765P7 747 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 APBB1IPQ7Z5R6 666 aaPredicted RBP16.9■□□□□ 0.3
MRPS28-209ENST00000522987 UROC1Q96N76 676 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 CORO1BQ9BR76 489 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 SH2B1Q9NRF2 756 aaPredicted RBP16.9■□□□□ 0.3
MRPS28-209ENST00000522987 TOPORSQ9NS56 1045 aaPredicted RBP16.9■□□□□ 0.3
MRPS28-209ENST00000522987 NUB1Q9Y5A7 615 aa16.9■□□□□ 0.3
MRPS28-209ENST00000522987 ZFP37Q9Y6Q3 630 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms