RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 OTUD7BQ6GQQ9 843 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 B3GNT9Q6UX72 402 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 PLXDC1Q8IUK5 500 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 TTC9BQ8N6N2 239 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 DCBLD1Q8N8Z6 715 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 ZBTB34Q8NCN2 500 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 OR10H5Q8NGA6 315 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 OR52N2Q8NGI0 321 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 PPP1R35Q8TAP8 253 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 EDAQ92838 391 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 CCDC136Q96JN2 1154 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 MNTQ99583 582 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 CGRRF1Q99675 332 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 ARMT1Q9H993 441 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 CLCA2Q9UQC9 943 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 NR2E3Q9Y5X4 410 aa6.58□□□□□ -1.36
SKP1-208ENST00000521216 GRM6O15303 877 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 SLC16A6O15403 523 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 CD1AP06126 327 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 SBK3P0C264 359 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 MAGEA10P43363 369 aaPredicted RBP6.57□□□□□ -1.36
SKP1-208ENST00000521216 SNAPC2Q13487 334 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 UBXN2BQ14CS0 331 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 CSRP2Q16527 193 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 HSP90AB2PQ58FF8 381 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 GPRIN1Q7Z2K8 1008 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 HEATR3Q7Z4Q2 680 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 DENND1CQ8IV53 801 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 GSTO2Q9H4Y5 243 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 LMBRD1Q9NUN5 540 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 ABCF2Q9UG63 623 aa6.57□□□□□ -1.36
SKP1-208ENST00000521216 MTHFD1P11586 935 aaKnown RBP6.56□□□□□ -1.36
SKP1-208ENST00000521216 MGAT1P26572 445 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 HK3P52790 923 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 RABGGTBP53611 331 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 RRP1BQ14684 758 aaKnown RBP6.56□□□□□ -1.36
SKP1-208ENST00000521216 FLYWCH1Q4VC44 716 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 PPP4R4Q6NUP7 873 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 SLC4A10Q6U841 1118 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 SEM1Q6ZVN7 128 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 MED25Q71SY5 747 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 DVL3Q92997 716 aaPredicted RBP6.56□□□□□ -1.36
SKP1-208ENST00000521216 SLAMF7Q9NQ25 335 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 FBXO34Q9NWN3 711 aa6.56□□□□□ -1.36
SKP1-208ENST00000521216 EIF2B4Q9UI10 523 aaKnown RBP6.56□□□□□ -1.36
SKP1-208ENST00000521216 DRGXA6NNA5 263 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 ERC2O15083 957 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 UBXN7O94888 489 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 ARIH2O95376 493 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 AMHP03971 560 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 ITGB1P05556 798 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 ALAS1P13196 640 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 SLC6A2P23975 617 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 HTR1BP28222 390 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 CHN2P52757 468 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 LLGL1Q15334 1064 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 PABPC1LQ4VXU2 614 aaKnown RBP6.55□□□□□ -1.36
SKP1-208ENST00000521216 DCAF17Q5H9S7 520 aaPredicted RBP6.55□□□□□ -1.36
SKP1-208ENST00000521216 C1QL3Q5VWW1 255 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 PRRT2Q7Z6L0 340 aaPredicted RBP6.55□□□□□ -1.36
SKP1-208ENST00000521216 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 KLHDC4Q8TBB5 520 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 RUNDC1Q96C34 613 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 CDK5RAP3Q96JB5 506 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 FAM193BQ96PV7 902 aaPredicted RBP6.55□□□□□ -1.36
SKP1-208ENST00000521216 CDK5RAP1Q96SZ6 601 aaKnown RBP6.55□□□□□ -1.36
SKP1-208ENST00000521216 NDC1Q9BTX1 674 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 PACSIN1Q9BY11 444 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 DDX20Q9UHI6 824 aaKnown RBP6.55□□□□□ -1.36
SKP1-208ENST00000521216 FEZ2Q9UHY8 353 aaPredicted RBP6.55□□□□□ -1.36
SKP1-208ENST00000521216 STXBP5LQ9Y2K9 1186 aa6.55□□□□□ -1.36
SKP1-208ENST00000521216 XDHP47989 1333 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 FRMPD2Q68DX3 1309 aaPredicted RBP6.54□□□□□ -1.36
SKP1-208ENST00000521216 KLRG2A4D1S0 409 aaPredicted RBP6.54□□□□□ -1.36
SKP1-208ENST00000521216 H3BML4 177 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 F2RL2O00254 374 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 LEFTY2O00292 366 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 ZNF20P17024 532 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 APOBEC3AP31941 199 aaPredicted RBP6.54□□□□□ -1.36
SKP1-208ENST00000521216 NHLH2Q02577 135 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 SPATS1Q496A3 300 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 USP39Q53GS9 565 aaKnown RBP6.54□□□□□ -1.36
SKP1-208ENST00000521216 METTL24Q5JXM2 366 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 DACT2Q5SW24 774 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 DRICH1Q6PGQ1 229 aaPredicted RBP6.54□□□□□ -1.36
SKP1-208ENST00000521216 DAAM2Q86T65 1068 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 C1orf210Q8IVY1 113 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 NLGN4YQ8NFZ3 816 aaPredicted RBP6.54□□□□□ -1.36
SKP1-208ENST00000521216 TBC1D15Q8TC07 691 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 EXTL1Q92935 676 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 TNPO1Q92973 898 aaKnown RBP6.54□□□□□ -1.36
SKP1-208ENST00000521216 SLC35A4Q96G79 324 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 C8orf48Q96LL4 319 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 C1orf112Q9NSG2 853 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 PNPOQ9NVS9 261 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 OBP2AQ9NY56 170 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 SORCS3Q9UPU3 1222 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 PCDHA1Q9Y5I3 950 aa6.54□□□□□ -1.36
SKP1-208ENST00000521216 CDHR4A6H8M9 788 aa6.53□□□□□ -1.36
SKP1-208ENST00000521216 B3GALT2O43825 422 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms