RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 PCDH15Q96QU1 1955 aa8.91□□□□□ -0.98
CSMD1-209ENST00000520630 APC2O95996 2303 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 CCDC69A6NI79 296 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 CHMP2AO43633 222 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 EPN2O95208 641 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 RHOP08100 348 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 CDC27P30260 824 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 DDIT3P35638 169 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 NPEPPSP55786 919 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 CDC42EP1Q00587 391 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 SETQ01105 290 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-209ENST00000520630 NAB2Q15742 525 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 AMHR2Q16671 573 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 PABPC1LQ4VXU2 614 aaKnown RBP8.9□□□□□ -0.98
CSMD1-209ENST00000520630 FAM78AQ5JUQ0 283 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 PKN3Q6P5Z2 889 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 TXNDC11Q6PKC3 985 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 NFXL1Q6ZNB6 911 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 KBTBD6Q86V97 674 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 LONP2Q86WA8 852 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 MICU3Q86XE3 530 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 TEX2Q8IWB9 1127 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 SPEM1Q8N4L4 309 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 SPRYD3Q8NCJ5 442 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 HASPINQ8TF76 798 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 PRPF31Q8WWY3 499 aaKnown RBP8.9□□□□□ -0.98
CSMD1-209ENST00000520630 RSPRY1Q96DX4 576 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 ZNF274Q96GC6 653 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-209ENST00000520630 CPB2Q96IY4 423 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 IER2Q9BTL4 223 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 COLEC11Q9BWP8 271 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 ADAM33Q9BZ11 813 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 NXF3Q9H4D5 531 aaKnown RBP8.9□□□□□ -0.98
CSMD1-209ENST00000520630 AVENQ9NQS1 362 aaPredicted RBP8.9□□□□□ -0.98
CSMD1-209ENST00000520630 BRPF3Q9ULD4 1205 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 POLIQ9UNA4 740 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 MRPS17Q9Y2R5 130 aaKnown RBP8.9□□□□□ -0.98
CSMD1-209ENST00000520630 COL4A3BPQ9Y5P4 624 aa8.9□□□□□ -0.98
CSMD1-209ENST00000520630 MAN2B1O00754 1011 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 TSPAN1O60635 241 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 PFKFB2O60825 505 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 KIF4AO95239 1232 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 SRGAP2CP0DJJ0 459 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 CALM1P0DP23 149 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 CALM2P0DP24 149 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 CALM3P0DP25 149 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 AKAP5P24588 427 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 CCNE1P24864 410 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 PDIA3P30101 505 aaKnown RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 CNR2P34972 360 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 SOX9P48436 509 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 LAMTOR4Q0VGL1 99 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 FOXC1Q12948 553 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 RAB33AQ14088 237 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 PSMD5Q16401 504 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 XKR3Q5GH77 459 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 APOA5Q6Q788 366 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 SRGAP1Q7Z6B7 1085 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 WDR5BQ86VZ2 330 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 CDR2LQ86X02 465 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 TMTC2Q8N394 836 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 NECAB1Q8N987 351 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 TMEM143Q96AN5 459 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 INTS4Q96HW7 963 aaKnown RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 ASB16Q96NS5 453 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 BBC3Q96PG8 261 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 SCNM1Q9BWG6 230 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 ZMYND12Q9H0C1 365 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 DHX33Q9H6R0 707 aaKnown RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 TRPV5Q9NQA5 729 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 FOXD4L1Q9NU39 408 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 GDE1Q9NZC3 331 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 KLK14Q9P0G3 267 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 DAXXQ9UER7 740 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 PIAS3Q9Y6X2 628 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 URB1O60287 2271 aaKnown RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 MYLKQ15746 1914 aa8.89□□□□□ -0.99
CSMD1-209ENST00000520630 GOLGA4Q13439 2230 aaKnown RBP8.89□□□□□ -0.99
CSMD1-209ENST00000520630 SCN1AP35498 2009 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 TMEM131Q92545 1883 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 KLF18A0A0U1RQI7 1052 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 EML1O00423 815 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 PTGESO14684 152 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 FOXD2O60548 495 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-209ENST00000520630 GDI1P31150 447 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 HOXA6P31267 233 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 OR1D2P34982 312 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 VIPR2P41587 438 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 FGD1P98174 961 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 SCRN1Q12765 414 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 STK3Q13188 491 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 UVSSAQ2YD98 709 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 FAM171A1Q5VUB5 890 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 CCDC83Q8IWF9 413 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 GTF3C6Q969F1 213 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 LRRC3BQ96PB8 259 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 RIT2Q99578 217 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 TTPALQ9BTX7 342 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 APOL6Q9BWW8 343 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 BRD9Q9H8M2 597 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms