RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 PARP1P09874 1014 aaKnown RBP8.97□□□□□ -0.97
LSM1-202ENST00000520286 EN2P19622 333 aaPredicted RBP8.97□□□□□ -0.97
LSM1-202ENST00000520286 DLG4P78352 724 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 MLANAQ16655 118 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 TUBB8Q3ZCM7 444 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 AGBL4Q5VU57 503 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 HIBCHQ6NVY1 386 aaPredicted RBP8.97□□□□□ -0.97
LSM1-202ENST00000520286 PDZD4Q76G19 769 aaPredicted RBP8.97□□□□□ -0.97
LSM1-202ENST00000520286 SAPCD2Q86UD0 394 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 DCBLD1Q8N8Z6 715 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 BRI3BPQ8WY22 251 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 AJUBAQ96IF1 538 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
LSM1-202ENST00000520286 SCLT1Q96NL6 688 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 CDC5LQ99459 802 aaKnown RBP8.97□□□□□ -0.97
LSM1-202ENST00000520286 C1orf43Q9BWL3 253 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 UBA5Q9GZZ9 404 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 OR10A2Q9H208 303 aa8.97□□□□□ -0.97
LSM1-202ENST00000520286 RUVBL1Q9Y265 456 aaKnown RBP8.97□□□□□ -0.97
LSM1-202ENST00000520286 WNT10BO00744 389 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 TEX33O43247 280 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 JUNP05412 331 aaKnown RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 CD1AP06126 327 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 VSIG10L2P0DP72 767 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 BPIFB4P59827 614 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 SP140Q13342 867 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 USP10Q14694 798 aaKnown RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 PDCD2Q16342 344 aaPredicted RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 KRT40Q6A162 431 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 CCDC174Q6PII3 467 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 ZNF572Q7Z3I7 529 aaPredicted RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 SMAP1Q8IYB5 467 aaPredicted RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 NKAPQ8N5F7 415 aaKnown RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 TNPO1Q92973 898 aaKnown RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 MSLNLQ96KJ4 702 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 P2RX7Q99572 595 aaKnown RBP8.96□□□□□ -0.98
LSM1-202ENST00000520286 SPATA25Q9BR10 227 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 TMEM168Q9H0V1 697 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 ZFP64Q9NPA5 681 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 STK32BQ9NY57 414 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 MOCS1Q9NZB8 636 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 PCDHGB2Q9Y5G2 931 aa8.96□□□□□ -0.98
LSM1-202ENST00000520286 LRRC10BA6NIK2 292 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 NRP1O14786 923 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 APOL1O14791 398 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 FGF18O76093 207 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 ZNF888P0CJ79 500 aaPredicted RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 PIK3CGP48736 1102 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 MAPK10P53779 464 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 SOX8P57073 446 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 ATP2C1P98194 919 aaPredicted RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 ATP2B3Q16720 1220 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 GPR155Q7Z3F1 870 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 PLXDC1Q8IUK5 500 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 FAM9AQ8IZU1 332 aaPredicted RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 RNF152Q8N8N0 203 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 ANKRD53Q8N9V6 530 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 FBXO15Q8NCQ5 510 aaPredicted RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 KBTBD7Q8WVZ9 684 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 KCNN1Q92952 543 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 SIGLEC10Q96LC7 697 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 COLEC11Q9BWP8 271 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 TRIM54Q9BYV2 358 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 C11orf54Q9H0W9 315 aaPredicted RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 SLC6A15Q9H2J7 730 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 SACM1LQ9NTJ5 587 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 GNL3LQ9NVN8 582 aaKnown RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 SIDT1Q9NXL6 827 aaKnown RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 AFF4Q9UHB7 1163 aaKnown RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 IRAK3Q9Y616 596 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 PDS5BQ9NTI5 1447 aa8.95□□□□□ -0.98
LSM1-202ENST00000520286 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
LSM1-202ENST00000520286 A0A087WV62 115 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 CYP1A1P04798 512 aaPredicted RBP8.94□□□□□ -0.98
LSM1-202ENST00000520286 ALOX15P16050 662 aaPredicted RBP8.94□□□□□ -0.98
LSM1-202ENST00000520286 HDCP19113 662 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 CSF2RBP32927 897 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 CHKAP35790 457 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 CASRP41180 1078 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 ALDH1A3P47895 512 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 CREMQ03060 361 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 EXOSC9Q06265 439 aaKnown RBP8.94□□□□□ -0.98
LSM1-202ENST00000520286 PMS2P11Q13670 270 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 ACAP1Q15027 740 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 C3orf38Q5JPI3 329 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 AFMIDQ63HM1 303 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 USP30Q70CQ3 517 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 OR5M3Q8NGP4 307 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 ARL8AQ96BM9 186 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 NTMQ9P121 344 aa8.94□□□□□ -0.98
LSM1-202ENST00000520286 hCG_1642624A0A1W2PR95 340 aa8.93□□□□□ -0.98
LSM1-202ENST00000520286 EIF5BO60841 1220 aaKnown RBP8.93□□□□□ -0.98
LSM1-202ENST00000520286 RAP2AP10114 183 aa8.93□□□□□ -0.98
LSM1-202ENST00000520286 TECP42680 631 aa8.93□□□□□ -0.98
LSM1-202ENST00000520286 FLT3LGP49771 235 aa8.93□□□□□ -0.98
LSM1-202ENST00000520286 ADCY7P51828 1080 aa8.93□□□□□ -0.98
LSM1-202ENST00000520286 DLX2Q07687 328 aaPredicted RBP8.93□□□□□ -0.98
LSM1-202ENST00000520286 GAGE13Q4V321 117 aa8.93□□□□□ -0.98
LSM1-202ENST00000520286 ZMAT1Q5H9K5 638 aa8.93□□□□□ -0.98
LSM1-202ENST00000520286 DACT2Q5SW24 774 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms