RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 HIBADHP31937 336 aaKnown RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 IL12RB1P42701 662 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 CLRN1P58418 232 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 CTXN1P60606 82 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 ATP8B2P98198 1209 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 DSC2Q02487 901 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 PRKD1Q15139 912 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 LRRC41Q15345 812 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 PGS1Q32NB8 556 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 AFMIDQ63HM1 303 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 SPTY2D1Q68D10 685 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 NAIF1Q69YI7 327 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 GADL1Q6ZQY3 521 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 HTR3DQ70Z44 454 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 FMNL3Q8IVF7 1028 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 TPH2Q8IWU9 490 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 ELOA2Q8IYF1 753 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 MYO1HQ8N1T3 1032 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 ZNF808Q8N4W9 903 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 MAGEB6Q8N7X4 407 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 OR52N2Q8NGI0 321 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 IFI44Q8TCB0 444 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 CLIP3Q96DZ5 547 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 CLPTM1LQ96KA5 538 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 MRGPRX4Q96LA9 322 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 LSM14BQ9BX40 385 aaKnown RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 KCNH6Q9H252 994 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 LDAHQ9H6V9 325 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 KMT5AQ9NQR1 393 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 CHPF2Q9P2E5 772 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 TESMINQ9Y4I5 508 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 CXorf49A8MYA2 514 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 ERC2O15083 957 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 AP1G1O43747 822 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 PARNO95453 639 aaKnown RBP4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 ATP5JP18859 108 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 PCSK1P29120 753 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 MAN2A2P49641 1150 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 CREMQ03060 361 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 TARDBPQ13148 414 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 MLC1Q15049 377 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 VPS72Q15906 364 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 DACT2Q5SW24 774 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 EFCAB12Q6NXP0 572 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 SEM1Q6ZVN7 128 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 EPM2AIP1Q7L775 607 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 CATIPQ7Z7H3 387 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 DNAJC10Q8IXB1 793 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 ZGPATQ8N5A5 531 aaKnown RBP4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 C3orf20Q8ND61 904 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 SLC35G2Q8TBE7 412 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 STON2Q8WXE9 905 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 TFAP2CQ92754 450 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 KAT5Q92993 513 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 TMX3Q96JJ7 454 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 ADOQ96SZ5 270 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 MRI1Q9BV20 369 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 PCGF6Q9BYE7 350 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 NOB1Q9ULX3 412 aaKnown RBP4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 ACTL7AQ9Y615 435 aa4.24□□□□□ -1.73
HMGB1P41-201ENST00000520234 MUSKO15146 869 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 POMCP01189 267 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 FTH1P19P0C7X4 201 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 RAP2AP10114 183 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 ALAS1P13196 640 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 ACRV1P26436 265 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 SMARCA1P28370 1054 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 ALDH1A3P47895 512 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 FXR1P51114 621 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 RABGGTBP53611 331 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 TLE1Q04724 770 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 CNGB1Q14028 1251 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 GFOD2Q3B7J2 385 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 ANKS6Q68DC2 871 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 ZNF585AQ6P3V2 769 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 B3GNT9Q6UX72 402 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 XYLT1Q86Y38 959 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 PLXDC1Q8IUK5 500 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 GRAMD1CQ8IYS0 662 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 MB21D1Q8N884 522 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 FBXO18Q8NFZ0 1043 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 NLGN4YQ8NFZ3 816 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 SLC35B2Q8TB61 432 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 DIS3LQ8TF46 1054 aaKnown RBP4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 ATXN2LQ8WWM7 1075 aaKnown RBP4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 RGMAQ96B86 450 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 FAM167AQ96KS9 214 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 DMRTA2Q96SC8 542 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 MNTQ99583 582 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 GPR87Q9BY21 358 aa4.23□□□□□ -1.73
HMGB1P41-201ENST00000520234 H3BML4 177 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 FTLP02792 175 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 MTHFD1P11586 935 aaKnown RBP4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 MALP21145 153 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 FPR1P21462 350 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 HK3P52790 923 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 NOGQ13253 232 aa4.22□□□□□ -1.73
HMGB1P41-201ENST00000520234 CRHR2Q13324 411 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms