RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 GSPT2Q8IYD1 628 aaKnown RBP7.92□□□□□ -1.14
PTPN12-213ENST00000519553 OR10H5Q8NGA6 315 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 CDK5RAP1Q96SZ6 601 aaKnown RBP7.92□□□□□ -1.14
PTPN12-213ENST00000519553 NDC1Q9BTX1 674 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 SPON1Q9HCB6 807 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 FAM30AQ9NZY2 134 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 CLCA2Q9UQC9 943 aa7.92□□□□□ -1.14
PTPN12-213ENST00000519553 NT5C1B-RDH14C9J2C7 533 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 SLC16A6O15403 523 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 ALDH2P05091 517 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 U2AF1L5P0DN76 240 aaPredicted RBP7.91□□□□□ -1.14
PTPN12-213ENST00000519553 MALP21145 153 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 HK3P52790 923 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 PTTG1IPP53801 180 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 U2AF1Q01081 240 aaKnown RBP eCLIP7.91□□□□□ -1.14
PTPN12-213ENST00000519553 CRHR2Q13324 411 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 KHDC1Q4VXA5 237 aaKnown RBP7.91□□□□□ -1.14
PTPN12-213ENST00000519553 EFCAB12Q6NXP0 572 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 ZFP28Q8NHY6 868 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 C1GALT1C1Q96EU7 318 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 ACO2Q99798 780 aaKnown RBP7.91□□□□□ -1.14
PTPN12-213ENST00000519553 FBXO34Q9NWN3 711 aa7.91□□□□□ -1.14
PTPN12-213ENST00000519553 XDHP47989 1333 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 GOLGA6L6A8MZA4 724 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 B8ZZF3 427 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 LEFTY2O00292 366 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 PLSCR1O15162 318 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 FTLP02792 175 aaPredicted RBP7.9□□□□□ -1.14
PTPN12-213ENST00000519553 CD1AP06126 327 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 SBK3P0C264 359 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 SLC6A4P31645 630 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 SNAPC2Q13487 334 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 METRNLQ641Q3 311 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 GADL1Q6ZQY3 521 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 UBE3BQ7Z3V4 1068 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 C14orf80Q86SX3 495 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 C3orf20Q8ND61 904 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 IL17DQ8TAD2 202 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 POLHQ9Y253 713 aa7.9□□□□□ -1.14
PTPN12-213ENST00000519553 NCANO14594 1321 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 TCRBV7S2A1N4TA0A589 114 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 H3BML4 177 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 GRM6O15303 877 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 MINDY4Q4G0A6 757 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 THEMIS2Q5TEJ8 643 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 SLC4A10Q6U841 1118 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 TMPRSS6Q8IU80 811 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 WDR75Q8IWA0 830 aaKnown RBP7.89□□□□□ -1.15
PTPN12-213ENST00000519553 ZBTB34Q8NCN2 500 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 TTC8Q8TAM2 541 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 PPP1R35Q8TAP8 253 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 NEU1Q99519 415 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 CGRRF1Q99675 332 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 GABBR1Q9UBS5 961 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 PCDHA3Q9Y5H8 950 aa7.89□□□□□ -1.15
PTPN12-213ENST00000519553 DRGXA6NNA5 263 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 C1QTNF3-AMACRE9PGA6 284 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 F2RL2O00254 374 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 PRRG2O14669 202 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 AMHP03971 560 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 MGAT1P26572 445 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 APOBEC3AP31941 199 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-213ENST00000519553 CNGB1Q14028 1251 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-213ENST00000519553 TOB2Q14106 344 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-213ENST00000519553 PABPC1LQ4VXU2 614 aaKnown RBP7.88□□□□□ -1.15
PTPN12-213ENST00000519553 DENND1CQ8IV53 801 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 EXTL1Q92935 676 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 KMT5AQ9NQR1 393 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 AURKAIP1Q9NWT8 199 aaPredicted RBP7.88□□□□□ -1.15
PTPN12-213ENST00000519553 CEP72Q9P209 647 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 POGKQ9P215 609 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 NR2E3Q9Y5X4 410 aa7.88□□□□□ -1.15
PTPN12-213ENST00000519553 KIAA0391O15091 583 aaKnown RBP7.87□□□□□ -1.15
PTPN12-213ENST00000519553 POMCP01189 267 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 HMGB1P09429 215 aaKnown RBP7.87□□□□□ -1.15
PTPN12-213ENST00000519553 MYBP10242 640 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 SLC6A2P23975 617 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 IL12RB1P42701 662 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 CHN2P52757 468 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 CREMQ03060 361 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 UBXN2BQ14CS0 331 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 ATP2B3Q16720 1220 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 FLYWCH1Q4VC44 716 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 USP39Q53GS9 565 aaKnown RBP7.87□□□□□ -1.15
PTPN12-213ENST00000519553 FAM102AQ5T9C2 384 aaPredicted RBP7.87□□□□□ -1.15
PTPN12-213ENST00000519553 OVCH2Q7RTZ1 564 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 HEATR3Q7Z4Q2 680 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 IL17RDQ8NFM7 739 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 LRFN3Q9BTN0 628 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 STXBP5LQ9Y2K9 1186 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 CHST2Q9Y4C5 530 aa7.87□□□□□ -1.15
PTPN12-213ENST00000519553 VSTM5A8MXK1 200 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 ERC2O15083 957 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 B3GALT2O43825 422 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 MARCH6O60337 910 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 UBXN7O94888 489 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 NKX6-1P78426 367 aaPredicted RBP7.86□□□□□ -1.15
PTPN12-213ENST00000519553 NHLH2Q02577 135 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 RNF207Q6ZRF8 634 aa7.86□□□□□ -1.15
PTPN12-213ENST00000519553 FAM90A1Q86YD7 464 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms