RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	HASPIN	Q8TF76	798 aa		26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	RPGRIP1	Q96KN7	1286 aa		26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	PLEKHA4	Q9H4M7	779 aa		26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	EXOC7	Q9UPT5	735 aa		26.39	■■□□□ 1.82
CNOT7-204	ENST00000518885	XPOT	O43592	962 aa	Known RBP	26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	CLCNKB	P51801	687 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	AMPD3	Q01432	767 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	UPP1	Q16831	310 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	SLFN12L	Q6IEE8	588 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	C15orf39	Q6ZRI6	1047 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	SPRYD3	Q8NCJ5	442 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	PIK3R5	Q8WYR1	880 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	MRPL44	Q9H9J2	332 aa	Known RBP	26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	MAN1C1	Q9NR34	630 aa		26.38	■■□□□ 1.81
CNOT7-204	ENST00000518885	OGT	O15294	1046 aa		26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	PPP2R3A	Q06190	1150 aa		26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	ALCAM	Q13740	583 aa		26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	PYM1	Q9BRP8	204 aa	Known RBP	26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	MSTO1	Q9BUK6	570 aa		26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	PANK2	Q9BZ23	570 aa		26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	CACNG4	Q9UBN1	327 aa		26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	MYH15	Q9Y2K3	1946 aa		26.37	■■□□□ 1.81
CNOT7-204	ENST00000518885	NMT1	P30419	496 aa	Known RBP	26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	PSMD5	Q16401	504 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	TMEM31	Q5JXX7	168 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	SFR1	Q86XK3	245 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	RNF135	Q8IUD6	432 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	CD302	Q8IX05	232 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	PDILT	Q8N807	584 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	IQUB	Q8NA54	791 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	CMAS	Q8NFW8	434 aa	Predicted RBP	26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	B3GALT6	Q96L58	329 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	CXCL16	Q9H2A7	254 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	TNMD	Q9H2S6	317 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	EPHX3	Q9H6B9	360 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	FAM13B	Q9NYF5	915 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	NUB1	Q9Y5A7	615 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	PCDHB13	Q9Y5F0	798 aa		26.36	■■□□□ 1.81
CNOT7-204	ENST00000518885	MYMK	A6NI61	221 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	PODXL	O00592	558 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	IDE	P14735	1019 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	ME1	P48163	572 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	HERC4	Q5GLZ8	1057 aa	Predicted RBP	26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	RTP2	Q5QGT7	225 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	TMC5	Q6UXY8	1006 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	STXBP4	Q6ZWJ1	553 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	ZNF720	Q7Z2F6	126 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	CCDC65	Q8IXS2	484 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	C12orf76	Q8N812	135 aa	Predicted RBP	26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	RPF1	Q9H9Y2	349 aa	Known RBP	26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	MAGEF1	Q9HAY2	307 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	TSHZ2	Q9NRE2	1034 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	OLFML3	Q9NRN5	406 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885	C5orf42	Q9H799	3197 aa		26.35	■■□□□ 1.81
CNOT7-204	ENST00000518885		A0A0B4J269	797 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	POSTN	Q15063	836 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	SLC10A6	Q3KNW5	377 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	FOXD4L3	Q6VB84	417 aa	Predicted RBP	26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	ANKS3	Q6ZW76	656 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	GPR149	Q86SP6	731 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	PALB2	Q86YC2	1186 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	DNAJC19	Q96DA6	116 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	ZMAT2	Q96NC0	199 aa	Known RBP	26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	FIZ1	Q96SL8	496 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	RHOBTB2	Q9BYZ6	727 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	GOLGA2P5	Q9HBQ8	144 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	ATP6V1D	Q9Y5K8	247 aa		26.34	■■□□□ 1.81
CNOT7-204	ENST00000518885	GPR37L1	O60883	481 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	CXCL8	P10145	99 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	FGFR3	P22607	806 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	BECN1	Q14457	450 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	SEZ6	Q53EL9	994 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	ACCS	Q96QU6	501 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	POMK	Q9H5K3	350 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	PANK4	Q9NVE7	773 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	ZDHHC7	Q9NXF8	308 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	UBQLN1	Q9UMX0	589 aa	Known RBP	26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	UST	Q9Y2C2	406 aa		26.33	■■□□□ 1.81
CNOT7-204	ENST00000518885	TGM5	O43548	720 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	GCNT3	O95395	438 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	CYP3A5	P20815	502 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	POU5F1	Q01860	360 aa	Known RBP	26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	LIN9	Q5TKA1	542 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	ADAL	Q6DHV7	355 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	PRSS55	Q6UWB4	352 aa	Predicted RBP	26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	CCDC149	Q6ZUS6	474 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	PLCD3	Q8N3E9	789 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	TDRD5	Q8NAT2	981 aa	Known RBP	26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	LNX1	Q8TBB1	728 aa	Predicted RBP	26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	STAM	Q92783	540 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	KHSRP	Q92945	711 aa	Known RBP eCLIP	26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	ACSF2	Q96CM8	615 aa	Predicted RBP	26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	KIF12	Q96FN5	646 aa		26.32	■■□□□ 1.8
CNOT7-204	ENST00000518885	CCDC195	A0A1B0GUA6	201 aa		26.31	■■□□□ 1.8
CNOT7-204	ENST00000518885	TTC26	A0AVF1	554 aa		26.31	■■□□□ 1.8
CNOT7-204	ENST00000518885	SYN3	O14994	580 aa		26.31	■■□□□ 1.8
CNOT7-204	ENST00000518885	SOX4	Q06945	474 aa	Predicted RBP	26.31	■■□□□ 1.8
CNOT7-204	ENST00000518885	L1TD1	Q5T7N2	865 aa	Known RBP	26.31	■■□□□ 1.8

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms