RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 NOTCH4Q99466 2003 aa13.66□□□□□ -0.22
TRAPPC9-204ENST00000518723 CEP295Q9C0D2 2601 aa13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 RECQL4O94761 1208 aa13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 BAG4O95429 457 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 FCARP24071 287 aa13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 RBM25P49756 843 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 RARRES1P49788 294 aa13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 SPEM2Q0P670 501 aa13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 CPLX2Q6PUV4 134 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 POTEHQ6S545 545 aa13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 POLR3FQ9H1D9 316 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 DAXXQ9UER7 740 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-204ENST00000518723 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 LRRIQ4A6NIV6 560 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 N4BP3O15049 544 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 MICAL2O94851 1124 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 CEBPBP17676 345 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 CCR3P51677 355 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 IRX6P78412 446 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 PPM1JQ5JR12 505 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 PRSS36Q5K4E3 855 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 PIK3AP1Q6ZUJ8 805 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 ANKS3Q6ZW76 656 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 CCDC43Q96MW1 224 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 SNTG2Q9NY99 539 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 NDRG2Q9UN36 371 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 CDY1Q9Y6F8 540 aa13.64□□□□□ -0.23
TRAPPC9-204ENST00000518723 CNOT1A5YKK6 2376 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 B3GAT3O94766 335 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 PTPN2P17706 415 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 SLC8B1Q6J4K2 584 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 CD300LGQ6UXG3 332 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 SKAP1Q86WV1 359 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 MAP4K3Q8IVH8 894 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 ZBTB8OSQ8IWT0 167 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 ZNF461Q8TAF7 563 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 IRF7Q92985 503 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 DDX27Q96GQ7 796 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 TRMT61BQ9BVS5 477 aaKnown RBP13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 CXCL16Q9H2A7 254 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 BRD9Q9H8M2 597 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 ZSWIM6Q9HCJ5 1215 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 ZFP14Q9HCL3 533 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 PCDHA12Q9UN75 941 aa13.63□□□□□ -0.23
TRAPPC9-204ENST00000518723 VWA8A3KMH1 1905 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 ZNF197O14709 1029 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 TRAPPC3O43617 180 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 FOXD2O60548 495 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 USO1O60763 962 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 ABLIM3O94929 683 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 XBP1P17861 261 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 IGFBP6P24592 240 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 GRM2Q14416 872 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 CSRP2Q16527 193 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 LPAL2Q16609 132 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 EARS2Q5JPH6 523 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 FAM78AQ5JUQ0 283 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 PRR23CQ6ZRP0 262 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 MCPH1Q8NEM0 835 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 OXER1Q8TDS5 423 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 PIGOQ8TEQ8 1089 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 UROC1Q96N76 676 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 ASB16Q96NS5 453 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 PPP1R10Q96QC0 940 aaKnown RBP13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 ADPGKQ9BRR6 497 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 LMAN1LQ9HAT1 526 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 ZNF334Q9HCZ1 680 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 GPRC5CQ9NQ84 441 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 SEMA4GQ9NTN9 838 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 STK36Q9NRP7 1315 aa13.62□□□□□ -0.23
TRAPPC9-204ENST00000518723 CDKL5O76039 1030 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 PAPSS2O95340 614 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 LRG1P02750 347 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 TKTP29401 623 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 CNR2P34972 360 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 CLCNKBP51801 687 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 MLLT6P55198 1093 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 ROR1Q01973 937 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 PRPF4BQ13523 1007 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 MAPK6Q16659 721 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 UPP1Q16831 310 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 PRR23BQ6ZRT6 265 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 NOSTRINQ8IVI9 506 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 TCEAL8Q8IYN2 117 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 DEPDC1BQ8WUY9 529 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 DDX1Q92499 740 aaKnown RBP13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 FAM3CQ92520 227 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 TCEAL4Q96EI5 215 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 CCDC113Q9H0I3 377 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 PIAS3Q9Y6X2 628 aa13.61□□□□□ -0.23
TRAPPC9-204ENST00000518723 WDR27A2RRH5 827 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms