RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 IL17RDQ8NFM7 739 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 NLGN4YQ8NFZ3 816 aaPredicted RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 MTFMTQ96DP5 389 aaKnown RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 CPPED1Q9BRF8 314 aaPredicted RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 C11orf54Q9H0W9 315 aaPredicted RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 LMBRD1Q9NUN5 540 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
SQLE-202ENST00000518604 NR2E3Q9Y5X4 410 aa5.71□□□□□ -1.5
SQLE-202ENST00000518604 A0A0G2JLL6 359 aaPredicted RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 ZNF623O75123 536 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 AMHP03971 560 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 ALAS1P13196 640 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 TYRP14679 529 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 ALDH1A3P47895 512 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 ZNF280AP59817 542 aaPredicted RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 NKX6-1P78426 367 aaPredicted RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 PURAQ00577 322 aaKnown RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 FAM214AQ32MH5 1076 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 PABPC1LQ4VXU2 614 aaKnown RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 SLC4A10Q6U841 1118 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 MAMDC4Q6UXC1 1216 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 GSPT2Q8IYD1 628 aaKnown RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 KIAA0319LQ8IZA0 1049 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 TTC9BQ8N6N2 239 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 FBXO18Q8NFZ0 1043 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 PPP1R35Q8TAP8 253 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 CXorf38Q8TB03 319 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 Q8TCH9 128 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 VRK1Q99986 396 aaPredicted RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 LRFN3Q9BTN0 628 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 LSM14BQ9BX40 385 aaKnown RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 PNPOQ9NVS9 261 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 DDX20Q9UHI6 824 aaKnown RBP5.7□□□□□ -1.5
SQLE-202ENST00000518604 L1RE1Q9UN81 338 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 PCDHA3Q9Y5H8 950 aa5.7□□□□□ -1.5
SQLE-202ENST00000518604 CAPN8A6NHC0 703 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 NT5C1B-RDH14C9J2C7 533 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 H3BUI4 141 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 POMCP01189 267 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 MYL1P05976 194 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 CACNB3P54284 484 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 FGL2Q14314 439 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 FBLN7Q53RD9 439 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 ANKS6Q68DC2 871 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 CYB5RLQ6IPT4 315 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 EFCAB12Q6NXP0 572 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 NPNTQ6UXI9 565 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 SGMS1Q86VZ5 419 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 CCAR1Q8IX12 1150 aaKnown RBP5.69□□□□□ -1.5
SQLE-202ENST00000518604 OR52N2Q8NGI0 321 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 SLC35B2Q8TB61 432 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 TFAP2CQ92754 450 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 EDAQ92838 391 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 RAB24Q969Q5 203 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 SARGQ9BW04 601 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 DDX21Q9NR30 783 aaKnown RBP eCLIP5.69□□□□□ -1.5
SQLE-202ENST00000518604 ABCF2Q9UG63 623 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 SLC23A1Q9UHI7 598 aa5.69□□□□□ -1.5
SQLE-202ENST00000518604 FEZ2Q9UHY8 353 aaPredicted RBP5.69□□□□□ -1.5
SQLE-202ENST00000518604 LRRC14BA6NHZ5 514 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 GOLGA6L6A8MZA4 724 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 WNT10BO00744 389 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 GRM6O15303 877 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 TRIM27P14373 513 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 PRDX5P30044 214 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 USP14P54578 494 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 FAM193AP78312 1265 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 UBXN2BQ14CS0 331 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 VPS72Q15906 364 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 FLYWCH1Q4VC44 716 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 ATXN7L2Q5T6C5 722 aaPredicted RBP5.68□□□□□ -1.5
SQLE-202ENST00000518604 NAIF1Q69YI7 327 aaPredicted RBP5.68□□□□□ -1.5
SQLE-202ENST00000518604 Q6ZSN1 163 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 HTR3DQ70Z44 454 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 C11orf96Q7Z7L8 435 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 ELOA2Q8IYF1 753 aaPredicted RBP5.68□□□□□ -1.5
SQLE-202ENST00000518604 DCBLD1Q8N8Z6 715 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 FBXO41Q8TF61 875 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 SLC35A4Q96G79 324 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 NDC1Q9BTX1 674 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 B3GNT5Q9BYG0 378 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 RLIMQ9NVW2 624 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 RUVBL1Q9Y265 456 aaKnown RBP5.68□□□□□ -1.5
SQLE-202ENST00000518604 PNPLA7Q6ZV29 1317 aa5.68□□□□□ -1.5
SQLE-202ENST00000518604 F2RL2O00254 374 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 TPP1O14773 563 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 SLC43A1O75387 559 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 ANXA1P04083 346 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 CD1AP06126 327 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 PHKG2P15735 406 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 RHCEP18577 417 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 RAB1AP62820 205 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 RHDQ02161 417 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 PLS1Q14651 629 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 SPTY2D1Q68D10 685 aaPredicted RBP5.67□□□□□ -1.5
SQLE-202ENST00000518604 ZNF529Q6P280 563 aa5.67□□□□□ -1.5
SQLE-202ENST00000518604 DARS2Q6PI48 645 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms