RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CPPED1Q9BRF8 314 aaPredicted RBP3.88□□□□□ -1.79
SKP1-203ENST00000517625 MRI1Q9BV20 369 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 LMBRD1Q9NUN5 540 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 GABBR1Q9UBS5 961 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ZDHHC8Q9ULC8 765 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 JAG2Q9Y219 1238 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 TCAF1Q9Y4C2 921 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 PAXBP1Q9Y5B6 917 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 ZMYM3Q14202 1370 aa3.88□□□□□ -1.79
SKP1-203ENST00000517625 A0A088AWK7 358 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 CAPN8A6NHC0 703 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 DIRC3C9JPN6 131 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 HAUS5O94927 633 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 POMCP01189 267 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 ALDH2P05091 517 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 KRT18P05783 430 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 MYL1P05976 194 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 RAP2AP10114 183 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 TYRP14679 529 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 PHKG2P15735 406 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 HTR1BP28222 390 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 NKX6-1P78426 367 aaPredicted RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 VPS72Q15906 364 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 KHDC1Q4VXA5 237 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 CCDC157Q569K6 752 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 ATXN7L2Q5T6C5 722 aaPredicted RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 EMC10Q5UCC4 262 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 EFCAB12Q6NXP0 572 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 OVCH2Q7RTZ1 564 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 LIMS2Q7Z4I7 341 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 HEATR3Q7Z4Q2 680 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 PDSS2Q86YH6 399 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 CCAR1Q8IX12 1150 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 GSPT2Q8IYD1 628 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 KIAA0319LQ8IZA0 1049 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 KLHDC4Q8TBB5 520 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 Q8TCH9 128 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 BRIX1Q8TDN6 353 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 TFAP2CQ92754 450 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 TMEM176AQ96HP8 235 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 CDK5RAP1Q96SZ6 601 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 BDH2Q9BUT1 245 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 LSM14BQ9BX40 385 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 PACSIN1Q9BY11 444 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 REXO4Q9GZR2 422 aaKnown RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 LDAHQ9H6V9 325 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 CD248Q9HCU0 757 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 DDX21Q9NR30 783 aaKnown RBP eCLIP3.87□□□□□ -1.79
SKP1-203ENST00000517625 SH3BP1Q9Y3L3 701 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 NR2E3Q9Y5X4 410 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 ACTL7AQ9Y615 435 aa3.87□□□□□ -1.79
SKP1-203ENST00000517625 FRMPD2Q68DX3 1309 aaPredicted RBP3.87□□□□□ -1.79
SKP1-203ENST00000517625 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 CAPN14A8MX76 684 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 NT5C1B-RDH14C9J2C7 533 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 TRIM24O15164 1050 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 PLIN1O60240 522 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 STC2O76061 302 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 CD1AP06126 327 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 GNAI3P08754 354 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 TRIM27P14373 513 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 SYN1P17600 705 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 RHCEP18577 417 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 RPL17P18621 184 aaKnown RBP3.86□□□□□ -1.79
SKP1-203ENST00000517625 FPR1P21462 350 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 PIK3CGP48736 1102 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 MAN2A2P49641 1150 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 CTSWP56202 376 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 RAB1AP62820 205 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 GNAI1P63096 354 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 RHDQ02161 417 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 SNAPC2Q13487 334 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 FGL2Q14314 439 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 GRM3Q14832 879 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 FAM214AQ32MH5 1076 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 CYB5RLQ6IPT4 315 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 ZNF529Q6P280 563 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 ZNF365Q70YC5 407 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 SGMS1Q86VZ5 419 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 FAM90A1Q86YD7 464 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 SLC35A4Q96G79 324 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 DCLRE1CQ96SD1 692 aaKnown RBP3.86□□□□□ -1.79
SKP1-203ENST00000517625 NDC1Q9BTX1 674 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 B3GNT5Q9BYG0 378 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 SIK2Q9H0K1 926 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 CNNM1Q9NRU3 951 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 PNPOQ9NVS9 261 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 JKAMPQ9P055 326 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 CFAP97Q9P2B7 532 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 ABCF2Q9UG63 623 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 SLC23A1Q9UHI7 598 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 TESMINQ9Y4I5 508 aa3.86□□□□□ -1.79
SKP1-203ENST00000517625 F2RL2O00254 374 aa3.85□□□□□ -1.79
SKP1-203ENST00000517625 FOXN3O00409 490 aaPredicted RBP3.85□□□□□ -1.79
SKP1-203ENST00000517625 GOLIM4O00461 696 aa3.85□□□□□ -1.79
SKP1-203ENST00000517625 TPP1O14773 563 aa3.85□□□□□ -1.79
SKP1-203ENST00000517625 GRM6O15303 877 aa3.85□□□□□ -1.79
SKP1-203ENST00000517625 PHGDHO43175 533 aaKnown RBP3.85□□□□□ -1.79
SKP1-203ENST00000517625 PPFIA4O75335 1185 aa3.85□□□□□ -1.79
SKP1-203ENST00000517625 SLC43A1O75387 559 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms