RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PARP6Q2NL67 630 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 MAP7D1Q3KQU3 841 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ZCWPW2Q504Y3 356 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RINT1Q6NUQ1 792 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 EP400NLQ6ZTU2 488 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 EXOC3L1Q86VI1 746 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RCOR2Q8IZ40 523 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ARHGEF26Q96DR7 871 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 TTC1Q99614 292 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 C11orf70Q9BRQ4 267 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 OSBPL8Q9BZF1 889 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 WWP1Q9H0M0 922 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 MYLK2Q9H1R3 596 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 FAM96AQ9H5X1 160 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 IRAK4Q9NWZ3 460 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 STARD13Q9Y3M8 1113 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 BAZ2BQ9UIF8 2168 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 KRT16P08779 473 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 RANBP1P43487 201 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SERPINB4P48594 390 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 STAT2P52630 851 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SNRPFP62306 86 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 COG7P83436 770 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 MYBPC2Q14324 1141 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 NLRX1Q86UT6 975 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 WDR75Q8IWA0 830 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 LNX1Q8TBB1 728 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SAR1AQ9NR31 198 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 ETAA1Q9NY74 926 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 HSPBP1Q9NZL4 362 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 PCDHA3Q9Y5H8 950 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 ZHX2Q9Y6X8 837 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 RSPH10B2B2RC85 870 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 TLR3O15455 904 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SORBS3O60504 671 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 RSPH10BP0C881 870 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 RARAP10276 462 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 PEX3P56589 373 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 CCDC15Q0P6D6 951 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 MEX3CQ5U5Q3 659 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 INTS5Q6P9B9 1019 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SLFN11Q7Z7L1 901 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 PRELID2Q8N945 189 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SHISA4Q96DD7 197 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 GPR101Q96P66 508 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 LXNQ9BS40 222 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 DDX56Q9NY93 547 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 RGPD8O14715 1765 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 H0YGN5 161 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 H7C0C1 242 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 STK10O94804 968 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 CALB1P05937 261 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 PYGMP11217 842 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 ATP5OP48047 213 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SLC12A3P55017 1021 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SNAP25P60880 206 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 DYNLT1P63172 113 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 KLRC3Q07444 240 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 HP1BP3Q5SSJ5 553 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 ACAD10Q6JQN1 1059 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SLC30A5Q8TAD4 765 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 DEPTORQ8TB45 409 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 MANSC1Q9H8J5 431 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 EBF2Q9HAK2 575 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 NFS1Q9Y697 457 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 ROBO3Q96MS0 1386 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 KDM4FA0A1W2PPD8 638 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 GOLGA8SH3BPF8 625 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 GOLGA8MH3BSY2 632 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 CAPN9O14815 690 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 DDX3YO15523 660 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 P4HBP07237 508 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 BLMHQ13867 455 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 KIF22Q14807 665 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 Q4G0T1 1027 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 TAF1BQ53T94 588 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 HYIQ5T013 277 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 MAP7D3Q8IWC1 876 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 CDKL2Q92772 493 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 IFT122Q9HBG6 1241 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 KIAA1586Q9HCI6 787 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 NINJ2Q9NZG7 142 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 IL1RAPL1Q9NZN1 696 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 CTNNAL1Q9UBT7 734 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SRP68Q9UHB9 627 aaKnown RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 SLC24A2Q9UI40 661 aa7.05□□□□□ -1.28
CPNE3-203ENST00000517490 FAF1Q9UNN5 650 aaPredicted RBP7.05□□□□□ -1.28
CPNE3-203ENST00000517490 RPS6KA4O75676 772 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 KRT38O76015 456 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ATP6V1C1P21283 382 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 MUTP22033 750 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 GEMIN4P57678 1058 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SP4Q02446 784 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 PTK6Q13882 451 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SEPT6Q14141 434 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 KRT81Q14533 505 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 GRAMD1BQ3KR37 738 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SLC10A5Q5PT55 438 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CASC4Q6P4E1 433 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms