RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 TLDC1Q6P9B6 456 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 PGM2L1Q6PCE3 622 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 DARS2Q6PI48 645 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 FAM111BQ6SJ93 734 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CASC1Q6TDU7 716 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 LMBR1LQ6UX01 489 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 TMC5Q6UXY8 1006 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CYP26C1Q6V0L0 522 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZPBP2Q6X784 338 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 LBX2Q6XYB7 198 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 LDHAL6AQ6ZMR3 332 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 C4orf50Q6ZRC1 276 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 LRRC55Q6ZSA7 311 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 C1orf122Q6ZSJ8 110 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 LHFPL2Q6ZUX7 228 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 FKBP9P1Q75LS8 142 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 C16orf59Q7L2K0 433 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 GET4Q7L5D6 327 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 EPM2AIP1Q7L775 607 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 MAATS1Q7Z4T9 603 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF804AQ7Z570 1209 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 PNMA8AQ86V59 439 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZSCAN30Q86W11 494 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 RASSF3Q86WH2 238 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ADGRG3Q86Y34 549 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CREBRFQ8IUR6 639 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 PHYKPLQ8IUZ5 450 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 FOXP4Q8IVH2 680 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC41A1Q8IVJ1 513 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 GLB1L2Q8IW92 636 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CMTR2Q8IYT2 770 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 OR8H2Q8N162 312 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 Q8N1Y9 231 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 MIER2Q8N344 545 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CBARPQ8N350 705 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 TTC30BQ8N4P2 665 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CHCHD4Q8N4Q1 142 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF276Q8N554 614 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 STPG3Q8N7X2 389 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 C7orf31Q8N865 590 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 NKAIN3Q8N8D7 197 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 C2orf69Q8N8R5 385 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SMC1BQ8NDV3 1235 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 C1orf162Q8NEQ5 155 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 VPS37AQ8NEZ2 397 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 OR5M3Q8NGP4 307 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZFP28Q8NHY6 868 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 UHMK1Q8TAS1 419 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 DEPTORQ8TB45 409 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 PLEKHO2Q8TD55 490 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 AFAP1L1Q8TED9 768 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 POF1BQ8WVV4 589 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 BTN2A2Q8WVV5 523 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 BRI3BPQ8WY22 251 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SSH1Q8WYL5 1049 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 KLHL6Q8WZ60 621 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ST8SIA2Q92186 375 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 HDAC2Q92769 488 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 GOLGA1Q92805 767 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 USP13Q92995 863 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CUL5Q93034 780 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 FERMT2Q96AC1 680 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 VOPP1Q96AW1 172 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 LENG9Q96B70 501 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 GCC1Q96CN9 775 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 PGBD4Q96DM1 585 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZBTB10Q96DT7 871 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 C1GALT1C1Q96EU7 318 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 HSPBAP1Q96EW2 488 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZNF503Q96F45 646 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 AHCYL2Q96HN2 611 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CCDC138Q96M89 665 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZSWIM3Q96MP5 696 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 WDR92Q96MX6 357 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 TAAR9Q96RI9 348 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 TSPAN18Q96SJ8 248 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 CPPED1Q9BRF8 314 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 PHF20Q9BVI0 1012 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 LSM14BQ9BX40 385 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 NAA15Q9BXJ9 866 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC46A2Q9BY10 475 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 GPR87Q9BY21 358 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ANO3Q9BYT9 981 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC29A3Q9BZD2 475 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 ZDHHC5Q9C0B5 715 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 WDR12Q9GZL7 423 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SIK2Q9H0K1 926 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 OSBPL5Q9H0X9 879 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 WNT8AQ9H1J5 351 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 NUP62CLQ9H1M0 184 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 MYLK2Q9H1R3 596 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 OR10A5Q9H207 317 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC12A5Q9H2X9 1139 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 MMRN2Q9H8L6 949 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 RSAD1Q9HA92 442 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 SLC52A2Q9HAB3 445 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 AGO4Q9HCK5 861 aaKnown RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 EPB41L4AQ9HCS5 686 aaPredicted RBP0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 NMRK2Q9NPI5 230 aa0.68□□□□□ -2.3
RNU4-54P-201ENST00000516428 RIC8AQ9NPQ8 531 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms