RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	PHF2	O75151	1096 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	GAST	P01350	101 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	LTA4H	P09960	611 aa	Known RBP	4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	MGAT1	P26572	445 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	AK2	P54819	239 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	LGALS4	P56470	323 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	MALL	Q13021	153 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	KRT72	Q14CN4	511 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	PGS1	Q32NB8	556 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	UAP1L1	Q3KQV9	507 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	C19orf54	Q5BKX5	351 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	TAS1R1	Q7RTX1	841 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	MORC1	Q86VD1	984 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	LYSMD2	Q8IV50	215 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	SLC41A1	Q8IVJ1	513 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	GRAMD1C	Q8IYS0	662 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	ENAH	Q8N8S7	591 aa	Predicted RBP	4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	ZBTB34	Q8NCN2	500 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	TSPEAR	Q8WU66	669 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	ACE2	Q9BYF1	805 aa	Predicted RBP	4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	EPC1	Q9H2F5	836 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	CEP72	Q9P209	647 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	NCDN	Q9UBB6	729 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	DPP7	Q9UHL4	492 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	TAGLN3	Q9UI15	199 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	PRSS50	Q9UI38	385 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	CDY2A	Q9Y6F7	541 aa		4.28	□□□□□ -1.72
CALCOCO2-223	ENST00000514267	SUV39H1	O43463	412 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NARS	O43776	548 aa	Known RBP	4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LY86	O95711	162 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LPL	P06858	475 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	C1S	P09871	688 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	GZMK	P49863	264 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CACNB3	P54284	484 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MXRA7	P84157	204 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PPARA	Q07869	468 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FHL2	Q14192	279 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TRIM25	Q14258	630 aa	Known RBP	4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HSP90AB4P	Q58FF6	505 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	OVCH2	Q7RTZ1	564 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	KIAA0319L	Q8IZA0	1049 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CAMKK1	Q8N5S9	505 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	OR5M3	Q8NGP4	307 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HAS1	Q92839	578 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	LENG9	Q96B70	501 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TNIP3	Q96KP6	325 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SLC2A13	Q96QE2	648 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	NLRC4	Q9NPP4	1024 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SERPINB13	Q9UIV8	391 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MAGEL2	Q9UJ55	1249 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PHTF1	Q9UMS5	762 aa		4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	REXO2	Q9Y3B8	237 aa	Known RBP	4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	CFAP20	Q9Y6A4	193 aa	Known RBP	4.27	□□□□□ -1.73
CALCOCO2-223	ENST00000514267		A0A0A6YYK5	440 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267		A0A1W2PR48	441 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267		A6NNZ2	444 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	PRR5-ARHGAP8	B1AHC4	643 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267		B5MCH6	92 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	GOLIM4	O00461	696 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HOXA3	O43365	443 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	HTRA2	O43464	458 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	B3GALT2	O43825	422 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RHOBTB3	O94955	611 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FOS	P01100	380 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RPLP2	P05387	115 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TM4SF4	P48230	202 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	AGFG1	P52594	562 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RABGGTB	P53611	331 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TAP1	Q03518	808 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MRPL49	Q13405	166 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	TOB2	Q14106	344 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ADRM1	Q16186	407 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	GRAMD1B	Q3KR37	738 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MUM1L1	Q5H9M0	696 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	RABL3	Q5HYI8	236 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	C10orf62	Q5T681	223 aa	Predicted RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	THEMIS2	Q5TEJ8	643 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ARMC6	Q6NXE6	501 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DARS2	Q6PI48	645 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	BTNL9	Q6UXG8	535 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	UNQ6494/PRO21346	Q6UXR6	183 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	ZFPM1	Q8IX07	1006 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	KRT78	Q8N1N4	520 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	DCLRE1C	Q96SD1	692 aa	Known RBP	4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MNT	Q99583	582 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	MYD88	Q99836	296 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SOX7	Q9BT81	388 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	SELENOO	Q9BVL4	669 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	KMT5A	Q9NQR1	393 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	USP18	Q9UMW8	372 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	L1RE1	Q9UN81	338 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	FAM50B	Q9Y247	325 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	IPP	Q9Y573	584 aa		4.26	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	XDH	P47989	1333 aa		4.25	□□□□□ -1.73
CALCOCO2-223	ENST00000514267	GAGE12B	A1L429	117 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms