RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 NKX2-3Q8TAU0 364 aa9.4□□□□□ -0.91
VCAN-208ENST00000512590 DCAF4Q8WV16 495 aa9.4□□□□□ -0.91
VCAN-208ENST00000512590 POLR3FQ9H1D9 316 aaPredicted RBP9.4□□□□□ -0.91
VCAN-208ENST00000512590 CYP39A1Q9NYL5 469 aa9.4□□□□□ -0.91
VCAN-208ENST00000512590 NPATQ14207 1427 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 WDR47O94967 919 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 IFNA16P05015 189 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 CYP19A1P11511 503 aaPredicted RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 CYP2C9P11712 490 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 CPA3P15088 417 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 TFDP2Q14188 446 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 MAPRE1Q15691 268 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 UAP1L1Q3KQV9 507 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 COBLL1Q53SF7 1204 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 C10orf76Q5T2E6 689 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 ANGEL2Q5VTE6 544 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 POTEDQ86YR6 584 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 ATP11CQ8NB49 1132 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 USP13Q92995 863 aaPredicted RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 MPP6Q9NZW5 540 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 SGSM2O43147 1006 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 VAMP4O75379 141 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 FGFR2P21802 821 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 RPS6KB1P23443 525 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 CXCR2P25025 360 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 PTPN3P26045 913 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 CHI3L1P36222 383 aaPredicted RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 KRT76Q01546 638 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 OCA2Q04671 838 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 NNTQ13423 1086 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 FASTKD1Q53R41 847 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 RINLQ6ZS11 566 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 CAMKK2Q96RR4 588 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 PIGSQ96S52 555 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 MANSC1Q9H8J5 431 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 MRPS17Q9Y2R5 130 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 PRAMEF22A3QJZ6 481 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 MAN1A2O60476 641 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 ZNF189O75820 626 aaPredicted RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 ECEL1O95672 775 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 CCR4P51679 360 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 CARTPTQ16568 116 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 ARHGEF25Q86VW2 580 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 KLHDC4Q8TBB5 520 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 MAGOHBQ96A72 148 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 DHX35Q9H5Z1 703 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 TBC1D22BQ9NU19 505 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 PKD2L2Q9NZM6 624 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 TRPM5Q9NZQ8 1165 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 A6NNZ2 444 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 ASAP2O43150 1006 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 PRODHO43272 600 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 PSMA4P25789 261 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 MKRN4PQ13434 485 aaPredicted RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 CCINQ13939 588 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
VCAN-208ENST00000512590 TUBB8Q3ZCM7 444 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 RASGEF1AQ8N9B8 481 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 BTBD9Q96Q07 612 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 TCF25Q9BQ70 676 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 RERGLQ9H628 205 aa9.39□□□□□ -0.91
VCAN-208ENST00000512590 MYO1GB0I1T2 1018 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 KCNJ18B7U540 433 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 ANXA5P08758 320 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 EPHX2P34913 555 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 KCNJ12Q14500 433 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 ATP6V0D2Q8N8Y2 350 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 NEK7Q8TDX7 302 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 GPR101Q96P66 508 aaPredicted RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 YY1AP1Q9H869 796 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 CYP26B1Q9NR63 512 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 STMN3Q9NZ72 180 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 GABBR1Q9UBS5 961 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 RNF14Q9UBS8 474 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 TNKSO95271 1327 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 TEX33O43247 280 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 UQCRBP14927 111 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 TMEM35BQ8NCS4 154 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 BCAS4Q8TDM0 211 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 ZNF496Q96IT1 587 aaPredicted RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 MRPS26Q9BYN8 205 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 NAGPAQ9UK23 515 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 PSMD3O43242 534 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 FKBP9O95302 570 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 PTPN1P18031 435 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 ITGAXP20702 1163 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 PCSK1P29120 753 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 ABL2P42684 1182 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 WHAMMP3Q1A5X7 153 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 FKBP9P1Q75LS8 142 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 ANKRD13AQ8IZ07 590 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 PYROXD1Q8WU10 500 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 UBE2OQ9C0C9 1292 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 SUCOQ9UBS9 1254 aaKnown RBP9.38□□□□□ -0.91
VCAN-208ENST00000512590 LCMT1Q9UIC8 334 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 WDR62O43379 1518 aa9.38□□□□□ -0.91
VCAN-208ENST00000512590 FKTNO75072 461 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms