RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 XXYLT1Q8NBI6 393 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 GPT2Q8TD30 523 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 MYLIPQ8WY64 445 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 FAM212AQ96EL1 285 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 KIF12Q96FN5 646 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 IGSF21Q96ID5 467 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 COLEC11Q9BWP8 271 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 LMCD1Q9NZU5 365 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 PUF60Q9UHX1 559 aaKnown RBP13.97□□□□□ -0.17
COL6A6-203ENST00000511332 UBQLN1Q9UMX0 589 aaKnown RBP13.97□□□□□ -0.17
COL6A6-203ENST00000511332 MAPK8IP1Q9UQF2 711 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 C2CD2Q9Y426 696 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 VWA8A3KMH1 1905 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 TSC2P49815 1807 aa13.97□□□□□ -0.17
COL6A6-203ENST00000511332 GOLGA8IPA6NC78 632 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 ZNF233A6NK53 670 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 GOLGA8JA6NMD2 632 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 LACTBL1A8MY62 500 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 CLIC2O15247 247 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 GRM6O15303 877 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 EXOC3O60645 756 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 LPXNO60711 386 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 NR3C1P04150 777 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 PRCPP42785 496 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 MORC3Q14149 939 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 MYBPC2Q14324 1141 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 SURF1Q15526 300 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 SNRNP35Q16560 246 aaKnown RBP13.96□□□□□ -0.17
COL6A6-203ENST00000511332 NFIL3Q16649 462 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 EDRF1Q3B7T1 1238 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 TIGD5Q53EQ6 642 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 JADE1Q6IE81 842 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 SLC9A9Q8IVB4 645 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 MRPL38Q96DV4 380 aaKnown RBP13.96□□□□□ -0.17
COL6A6-203ENST00000511332 DDX27Q96GQ7 796 aaKnown RBP13.96□□□□□ -0.17
COL6A6-203ENST00000511332 FBXL18Q96ME1 805 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 ZMAT2Q96NC0 199 aaKnown RBP13.96□□□□□ -0.17
COL6A6-203ENST00000511332 TSG101Q99816 390 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 CXCL16Q9H2A7 254 aa13.96□□□□□ -0.17
COL6A6-203ENST00000511332 ALG13Q9NP73 1137 aaKnown RBP13.96□□□□□ -0.17
COL6A6-203ENST00000511332 PRG3Q9Y2Y8 225 aaPredicted RBP13.96□□□□□ -0.17
COL6A6-203ENST00000511332 SF3B1O75533 1304 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 NT5C1B-RDH14C9J2C7 533 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 TMEM189-UBE2V1I3L0A0 370 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 RFXAPO00287 272 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 BIN1O00499 593 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 NFICP08651 508 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 POU3F3P20264 500 aaPredicted RBP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 CYP3A5P20815 502 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 IGFBP4P22692 258 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 RPL13P26373 211 aaKnown RBP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 RPL9P32969 192 aaKnown RBP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 BMS1Q14692 1282 aaKnown RBP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 PDE12Q6L8Q7 609 aaKnown RBP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 DDX53Q86TM3 631 aaKnown RBP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 TMEM173Q86WV6 379 aaPredicted RBP13.95□□□□□ -0.18
COL6A6-203ENST00000511332 ADSSL1Q8N142 457 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 BEST2Q8NFU1 509 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 SPPL3Q8TCT6 385 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 TLR9Q9NR96 1032 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 TUBGCP4Q9UGJ1 667 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 ADAM28Q9UKQ2 775 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 FRMD4BQ9Y2L6 1034 aa13.95□□□□□ -0.18
COL6A6-203ENST00000511332 PODXLO00592 558 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 KIF4AO95239 1232 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 NR2F2P24468 414 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 SCN1AP35498 2009 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 CLCNKBP51801 687 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 SOX4Q06945 474 aaPredicted RBP13.94□□□□□ -0.18
COL6A6-203ENST00000511332 SPAG1Q07617 926 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
COL6A6-203ENST00000511332 ADGRE1Q14246 886 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 UPP1Q16831 310 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 ISM2Q6H9L7 571 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 CENPPQ6IPU0 288 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 CBWD2Q8IUF1 395 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 ZSWIM2Q8NEG5 633 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 CACTINQ8WUQ7 758 aaKnown RBP13.94□□□□□ -0.18
COL6A6-203ENST00000511332 BCL7CQ8WUZ0 217 aaPredicted RBP13.94□□□□□ -0.18
COL6A6-203ENST00000511332 PPP2R3CQ969Q6 453 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
COL6A6-203ENST00000511332 C18orf25Q96B23 403 aaPredicted RBP13.94□□□□□ -0.18
COL6A6-203ENST00000511332 DHTKD1Q96HY7 919 aaPredicted RBP13.94□□□□□ -0.18
COL6A6-203ENST00000511332 GOLGA2P5Q9HBQ8 144 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 ENTPD7Q9NQZ7 604 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 DMAC2Q9NW81 257 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 MTCH2Q9Y6C9 303 aa13.94□□□□□ -0.18
COL6A6-203ENST00000511332 PRRC2BQ5JSZ5 2229 aaKnown RBP13.93□□□□□ -0.18
COL6A6-203ENST00000511332 BICDL2A1A5D9 508 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 MAPK13O15264 365 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 LRPAP1P30533 357 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 CYP24A1Q07973 514 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 PSMD6Q15008 389 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 ZBTB6Q15916 424 aa13.93□□□□□ -0.18
COL6A6-203ENST00000511332 CCDC183Q5T5S1 534 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms