RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 GLRA4Q5JXX5 417 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 HDAC7Q8WUI4 952 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 SUSD6Q92537 303 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 TTPALQ9BTX7 342 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 PANK2Q9BZ23 570 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 GPR62Q9BZJ7 368 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 PCDHA7Q9UN72 937 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 BDP1A6H8Y1 2624 aa21.69■■□□□ 1.06
SFXN1-209ENST00000508290 PPP1R37O75864 691 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 CLCN4P51793 760 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 PPP2R3AQ06190 1150 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 FOXD4L6Q3SYB3 417 aaPredicted RBP21.68■■□□□ 1.06
SFXN1-209ENST00000508290 RESP18Q5W5W9 173 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 SYCE2Q6PIF2 218 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 CYP26C1Q6V0L0 522 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 FOXD4L3Q6VB84 417 aaPredicted RBP21.68■■□□□ 1.06
SFXN1-209ENST00000508290 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.68■■□□□ 1.06
SFXN1-209ENST00000508290 PIK3R5Q8WYR1 880 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 RIPOR3Q96MK2 946 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 PAAF1Q9BRP4 392 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 MSTO1Q9BUK6 570 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 STRA6Q9BX79 667 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 SCAND2PQ9GZW5 306 aaPredicted RBP21.68■■□□□ 1.06
SFXN1-209ENST00000508290 S1PR5Q9H228 398 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 ADAM7Q9H2U9 754 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 SFXN1Q9H9B4 322 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 PANK4Q9NVE7 773 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 STYXL1Q9Y6J8 313 aa21.68■■□□□ 1.06
SFXN1-209ENST00000508290 NCOR1O75376 2440 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 C19orf67A6NJJ6 358 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 C2CD2LO14523 706 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 SSTR3P32745 418 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-209ENST00000508290 MTHFRP42898 656 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 CLCNKBP51801 687 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 RBM10P98175 930 aaKnown RBP21.67■■□□□ 1.06
SFXN1-209ENST00000508290 CBX2Q14781 532 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-209ENST00000508290 SLC10A6Q3KNW5 377 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 DHX58Q96C10 678 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 FBXL18Q96ME1 805 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 ACCSQ96QU6 501 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 PHF7Q9BWX1 381 aaPredicted RBP21.67■■□□□ 1.06
SFXN1-209ENST00000508290 TMEM206Q9H813 350 aa21.67■■□□□ 1.06
SFXN1-209ENST00000508290 TTC26A0AVF1 554 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 F8W810 466 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 TEX28O15482 410 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 GCNT3O95395 438 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 GLUD1P00367 558 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 ADRB2P07550 413 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 CYP3A5P20815 502 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 PAX3P23760 479 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 ZC2HC1CQ53FD0 456 aaPredicted RBP21.66■■□□□ 1.06
SFXN1-209ENST00000508290 L1TD1Q5T7N2 865 aaKnown RBP21.66■■□□□ 1.06
SFXN1-209ENST00000508290 FAM171A1Q5VUB5 890 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 TAS1R1Q7RTX1 841 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 RIN2Q8WYP3 895 aaPredicted RBP21.66■■□□□ 1.06
SFXN1-209ENST00000508290 SPATA32Q96LK8 384 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 RHOBTB2Q9BYZ6 727 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 TRIM9Q9C026 710 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 PLEKHA4Q9H4M7 779 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 RPF1Q9H9Y2 349 aaKnown RBP21.66■■□□□ 1.06
SFXN1-209ENST00000508290 USP25Q9UHP3 1055 aa21.66■■□□□ 1.06
SFXN1-209ENST00000508290 UBQLN1Q9UMX0 589 aaKnown RBP21.66■■□□□ 1.06
SFXN1-209ENST00000508290 SPDYE4A6NLX3 237 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 POLR2DO15514 142 aaKnown RBP21.65■■□□□ 1.06
SFXN1-209ENST00000508290 FAM189A1O60320 539 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 CXCL8P10145 99 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 EPCAMP16422 314 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 ADALQ6DHV7 355 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 C15orf39Q6ZRI6 1047 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 CMASQ8NFW8 434 aaPredicted RBP21.65■■□□□ 1.06
SFXN1-209ENST00000508290 ZMAT2Q96NC0 199 aaKnown RBP21.65■■□□□ 1.06
SFXN1-209ENST00000508290 C7orf25Q9BPX7 421 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 CXCL16Q9H2A7 254 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 ASB7Q9H672 318 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 DERAQ9Y315 318 aa21.65■■□□□ 1.06
SFXN1-209ENST00000508290 PODXLO00592 558 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 FGFR3P22607 806 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 NUCB2P80303 420 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 RTP2Q5QGT7 225 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 ATAT1Q5SQI0 421 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 ANKS3Q6ZW76 656 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 CEP57L1Q8IYX8 460 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 HASPINQ8TF76 798 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 LEO1Q8WVC0 666 aaPredicted RBP21.64■■□□□ 1.05
SFXN1-209ENST00000508290 RABGGTAQ92696 567 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 C1QTNF1Q9BXJ1 281 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 HAPLN2Q9GZV7 340 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 CPSF3Q9UKF6 684 aaKnown RBP21.64■■□□□ 1.05
SFXN1-209ENST00000508290 AGO2Q9UKV8 859 aaKnown RBP21.64■■□□□ 1.05
SFXN1-209ENST00000508290 KCNH3Q9ULD8 1083 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 ZDHHC9Q9Y397 364 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 NUB1Q9Y5A7 615 aa21.64■■□□□ 1.05
SFXN1-209ENST00000508290 SYN3O14994 580 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 KIAA0391O15091 583 aaKnown RBP21.63■■□□□ 1.05
SFXN1-209ENST00000508290 LDHAP00338 332 aaKnown RBP21.63■■□□□ 1.05
SFXN1-209ENST00000508290 MYL1P05976 194 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 ALADP13716 330 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 CMA1P23946 247 aa21.63■■□□□ 1.05
SFXN1-209ENST00000508290 ENOX2Q16206 610 aaKnown RBP21.63■■□□□ 1.05
SFXN1-209ENST00000508290 PSMD5Q16401 504 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms