RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 DENND2DQ9H6A0 471 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 NEK6Q9HC98 313 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 CD209Q9NNX6 404 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 SIRT5Q9NXA8 310 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 ABI2Q9NYB9 513 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 PNMA6EA0A0J9YXQ4 647 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 A8MXQ7 604 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 CPLX1O14810 134 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 EXTL3O43909 919 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 CPA1P15085 419 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 TCEA1P23193 301 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MARK3P27448 753 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 STX2P32856 288 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 EVI2BP34910 448 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 TRIM23P36406 574 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 HSD17B3P37058 310 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 ALDH18A1P54886 795 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 GNG2P59768 71 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 RGS21Q2M5E4 152 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 SHEQ5VZ18 495 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 C4orf50Q6ZRC1 276 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 BARGINQ6ZT62 677 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MIGA2Q7L4E1 593 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 APTXQ7Z2E3 356 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 METTL3Q86U44 580 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 DCP2Q8IU60 420 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 FITM2Q8N6M3 262 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 RNF169Q8NCN4 708 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 DDI1Q8WTU0 396 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 ARHGEF2Q92974 986 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MOGAT1Q96PD6 335 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 CDRT15Q96T59 188 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 IFT22Q9H7X7 185 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 TLR7Q9NYK1 1049 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 MOSPD1Q9UJG1 213 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 AGO2Q9UKV8 859 aaKnown RBP11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
PDLIM5-210ENST00000508216 AGLP35573 1532 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 ATP10BO94823 1461 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 MADDQ8WXG6 1647 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 A0A087WWV3 80 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 CLOCKO15516 846 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 NDUFA10O95299 355 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 FUCA1P04066 466 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 ZCCHC18P0CG32 403 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 CMA1P23946 247 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 PSMA5P28066 241 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC26A3P40879 764 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 IST1P53990 364 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 ERVK-24P63145 666 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 RBL2Q08999 1139 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 KLHL30Q0D2K2 578 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 PSMD6Q15008 389 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 NEUROD2Q15784 382 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 SATL1Q86VE3 508 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 RIN3Q8TB24 985 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 NXPE3Q969Y0 559 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF641Q96N77 438 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 ECSITQ9BQ95 431 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 CDHR5Q9HBB8 845 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC39A1Q9NY26 324 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 REXO2Q9Y3B8 237 aaKnown RBP11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 EPN1Q9Y6I3 576 aaPredicted RBP11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 AK5Q9Y6K8 562 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 CDC42BPGQ6DT37 1551 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 MROH7-TTC4A0A0A0MT08 1334 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
PDLIM5-210ENST00000508216 MYH2Q9UKX2 1941 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 PNMA6FA0A0J9YX94 578 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 GRID2IPA4D2P6 1211 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 ZSCAN5BA6NJL1 495 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 HNRNPCL2B2RXH8 293 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 POLR1CO15160 346 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 RPN1P04843 607 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 GSTM1P09488 218 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 ESRRAP11474 423 aaPredicted RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 NDUFA8P51970 172 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 MAGOHP61326 146 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 POLR2GP62487 172 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 UBXN1Q04323 297 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 GRIN1Q05586 938 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 TPTE2Q6XPS3 522 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 RBM44Q6ZP01 1051 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 MIER3Q7Z3K6 550 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 PEX26Q7Z412 305 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 LIMS2Q7Z4I7 341 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 LRRTM3Q86VH5 581 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 NT5DC4Q86YG4 428 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 SHCBP1Q8NEM2 672 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 CERKQ8TCT0 537 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 SYMPKQ92797 1274 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 MAGOHBQ96A72 148 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 NAP1L4Q99733 375 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-210ENST00000508216 TDRD1Q9BXT4 1180 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms