RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 CLCNKBP51801 687 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 SEZ6Q53EL9 994 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 L1TD1Q5T7N2 865 aaKnown RBP17.03■□□□□ 0.32
COL1A1-211ENST00000507689 ALKAL1Q6UXT8 129 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 KIF12Q96FN5 646 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 RIPOR3Q96MK2 946 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 NECAB3Q96P71 396 aaPredicted RBP17.03■□□□□ 0.32
COL1A1-211ENST00000507689 VN1R3Q9BXE9 311 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 GPR62Q9BZJ7 368 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 KBTBD4Q9NVX7 518 aa17.03■□□□□ 0.32
COL1A1-211ENST00000507689 AGO2Q9UKV8 859 aaKnown RBP17.03■□□□□ 0.32
COL1A1-211ENST00000507689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-211ENST00000507689 A0A0B4J269 797 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 TMEM189-UBE2V1I3L0A0 370 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 PODXLO00592 558 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 ABLIM1O14639 778 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 CXCL8P10145 99 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 CMA1P23946 247 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 E2F4Q16254 413 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 XKR4Q5GH76 650 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-211ENST00000507689 TAS1R1Q7RTX1 841 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 ADHFE1Q8IWW8 467 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 GJD3Q8N144 294 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 CCDC47Q96A33 483 aaKnown RBP17.02■□□□□ 0.32
COL1A1-211ENST00000507689 FBXL18Q96ME1 805 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 NECTIN4Q96NY8 510 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 APOL5Q9BWW9 433 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 TRIM9Q9C026 710 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 CHST7Q9NS84 486 aa17.02■□□□□ 0.32
COL1A1-211ENST00000507689 UBQLN1Q9UMX0 589 aaKnown RBP17.02■□□□□ 0.32
COL1A1-211ENST00000507689 USP15Q9Y4E8 981 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-211ENST00000507689 F8W810 466 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 LDHAP00338 332 aaKnown RBP17.01■□□□□ 0.31
COL1A1-211ENST00000507689 MTHFRP42898 656 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 AFMP43652 599 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 RBM10P98175 930 aaKnown RBP17.01■□□□□ 0.31
COL1A1-211ENST00000507689 UPP1Q16831 310 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 SLC10A6Q3KNW5 377 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 ATAT1Q5SQI0 421 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 KIAA0319Q5VV43 1072 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 BEST2Q8NFU1 509 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 VN1R2Q8NFZ6 395 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
COL1A1-211ENST00000507689 C7orf25Q9BPX7 421 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 PAAF1Q9BRP4 392 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 SFXN1Q9H9B4 322 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 FNIP2Q9P278 1114 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 CACNG4Q9UBN1 327 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 MYO7AQ13402 2215 aa17.01■□□□□ 0.31
COL1A1-211ENST00000507689 EYSQ5T1H1 3165 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 ATG2AQ2TAZ0 1938 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 FRMD3A2A2Y4 597 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 TEX28O15482 410 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 SLFN14P0C7P3 912 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 EPCAMP16422 314 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 MCM4P33991 863 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 SYKP43405 635 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 CLCN4P51793 760 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 CBX2Q14781 532 aaPredicted RBP17■□□□□ 0.31
COL1A1-211ENST00000507689 NAB2Q15742 525 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 PSMD5Q16401 504 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 RARS2Q5T160 578 aaKnown RBP17■□□□□ 0.31
COL1A1-211ENST00000507689 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
COL1A1-211ENST00000507689 B3GALT6Q96L58 329 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 FIZ1Q96SL8 496 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 ADAM7Q9H2U9 754 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 GOLGA2P5Q9HBQ8 144 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 RXFP1Q9HBX9 757 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 ZDHHC9Q9Y397 364 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 R3HCC1Q9Y3T6 440 aaKnown RBP17■□□□□ 0.31
COL1A1-211ENST00000507689 NR2E1Q9Y466 385 aa17■□□□□ 0.31
COL1A1-211ENST00000507689 TCF20Q9UGU0 1960 aaKnown RBP16.99■□□□□ 0.31
COL1A1-211ENST00000507689 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 TTC26A0AVF1 554 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 ARHGEF37A1IGU5 675 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 LACTBL1A8MY62 500 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 ANKRD63C9JTQ0 380 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 H7C4K7 107 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 KIAA0391O15091 583 aaKnown RBP16.99■□□□□ 0.31
COL1A1-211ENST00000507689 LILRB3O75022 631 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 IL18RAPO95256 599 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 C1RP00736 705 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 MYBP10242 640 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 PFKFB1P16118 471 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 CYP3A5P20815 502 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 TNFSF9P41273 254 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 ACOT2P49753 483 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 POU5F1Q01860 360 aaKnown RBP16.99■□□□□ 0.31
COL1A1-211ENST00000507689 KCNC3Q14003 757 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 TMEM132DQ14C87 1099 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 FAM26FQ5R3K3 315 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 LIN9Q5TKA1 542 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 ARMCX5Q6P1M9 558 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 CNNM4Q6P4Q7 775 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 UNC13DQ70J99 1090 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 PALB2Q86YC2 1186 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 GLYCTKQ8IVS8 523 aa16.99■□□□□ 0.31
COL1A1-211ENST00000507689 APPL2Q8NEU8 664 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms