RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FLYWCH1Q4VC44 716 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 OTUD7BQ6GQQ9 843 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 GADL1Q6ZQY3 521 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 PRRT2Q7Z6L0 340 aaPredicted RBP4.38□□□□□ -1.71
LSM6-205ENST00000507449 PLEKHH3Q7Z736 793 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 DAAM2Q86T65 1068 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 TAX1BP1Q86VP1 789 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 PPP1R3BQ86XI6 285 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 XYLT1Q86Y38 959 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 SH2D3CQ8N5H7 860 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 FBXO41Q8TF61 875 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 PMM1Q92871 262 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 TCF25Q9BQ70 676 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 LSM14BQ9BX40 385 aaKnown RBP4.38□□□□□ -1.71
LSM6-205ENST00000507449 NAA15Q9BXJ9 866 aaKnown RBP4.38□□□□□ -1.71
LSM6-205ENST00000507449 ZNF700Q9H0M5 742 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 XYLT2Q9H1B5 865 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 USP40Q9NVE5 1235 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 PNPOQ9NVS9 261 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 PPP4R1LQ9P1A2 415 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 PNPLA7Q6ZV29 1317 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 ADAMTS20P59510 1910 aa4.38□□□□□ -1.71
LSM6-205ENST00000507449 OTOL1A6NHN0 477 aaPredicted RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 PRSS29PA6NIE9 313 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 H3BUI4 141 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 PLIN1O60240 522 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 CD1AP06126 327 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 RAP2AP10114 183 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 BMP7P18075 431 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 PRDX5P30044 214 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 FAM193AP78312 1265 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 TBC1D10BQ4KMP7 808 aaPredicted RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 DACT2Q5SW24 774 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 RNF220Q5VTB9 566 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 SLFN13Q68D06 897 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 PPP4R4Q6NUP7 873 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 FAM111BQ6SJ93 734 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 SEM1Q6ZVN7 128 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 PDZD4Q76G19 769 aaPredicted RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 GPRIN1Q7Z2K8 1008 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 TMEM176AQ96HP8 235 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 FAM167AQ96KS9 214 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 MRGPRX1Q96LB2 322 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 ZNF512Q96ME7 567 aaPredicted RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 MRI1Q9BV20 369 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 C1orf43Q9BWL3 253 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 SSBP3Q9BWW4 388 aaPredicted RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 APOL5Q9BWW9 433 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 CPEB1Q9BZB8 566 aaKnown RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 C11orf54Q9H0W9 315 aaPredicted RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 MRPL46Q9H2W6 279 aaKnown RBP4.37□□□□□ -1.71
LSM6-205ENST00000507449 ZCCHC4Q9H5U6 513 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 MSL2Q9HCI7 577 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 PARD6AQ9NPB6 346 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 MOCS1Q9NZB8 636 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 USP25Q9UHP3 1055 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 PCDHA1Q9Y5I3 950 aa4.37□□□□□ -1.71
LSM6-205ENST00000507449 TCRBV7S2A1N4TA0A589 114 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 GOLIM4O00461 696 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 GRM6O15303 877 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 FOXS1O43638 330 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 ARIH2O95376 493 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 AHSGP02765 367 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 ADRB1P08588 477 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 NPR1P16066 1061 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 ATP5JP18859 108 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 PEX2P28328 305 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 GPSM2P81274 684 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 FGL2Q14314 439 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 NFIXQ14938 502 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 CCDC157Q569K6 752 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 TCTN3Q6NUS6 607 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 DARS2Q6PI48 645 aaKnown RBP4.36□□□□□ -1.71
LSM6-205ENST00000507449 IL31RAQ8NI17 732 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 LRTOMTQ8WZ04 291 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 ANKS1AQ92625 1134 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 NDC1Q9BTX1 674 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 PCGF6Q9BYE7 350 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 ADAM7Q9H2U9 754 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 WDCPQ9H6R7 721 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 FBXO34Q9NWN3 711 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 PLA2G3Q9NZ20 509 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 FEZ2Q9UHY8 353 aaPredicted RBP4.36□□□□□ -1.71
LSM6-205ENST00000507449 SH3BP1Q9Y3L3 701 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 USP19O94966 1318 aa4.36□□□□□ -1.71
LSM6-205ENST00000507449 CFAP69A5D8W1 941 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 MYO1FO00160 1098 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 GPR42O15529 346 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 PJA2O43164 708 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 TEX33O43247 280 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 FRS3O43559 492 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 PRICKLE3O43900 615 aaPredicted RBP4.35□□□□□ -1.71
LSM6-205ENST00000507449 PQBP1O60828 265 aaKnown RBP4.35□□□□□ -1.71
LSM6-205ENST00000507449 MATN4O95460 622 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 PLATP00750 562 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 MYL3P08590 195 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 FTH1P19P0C7X4 201 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 MYF5P13349 255 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 SERPINB3P29508 390 aa4.35□□□□□ -1.71
LSM6-205ENST00000507449 CACNB3P54284 484 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms