RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 KLHL40Q2TBA0 621 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 CT47A1Q5JQC4 288 aaPredicted RBP10.57□□□□□ -0.72
SFXN1-205ENST00000506963 CCDC183Q5T5S1 534 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 RNF168Q8IYW5 571 aaPredicted RBP10.57□□□□□ -0.72
SFXN1-205ENST00000506963 KLHL23Q8NBE8 558 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 ZSWIM2Q8NEG5 633 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 ARNTL2Q8WYA1 636 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 SAAL1Q96ER3 474 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
SFXN1-205ENST00000506963 IGSF21Q96ID5 467 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 MFSD14AQ96MC6 490 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 FAM193BQ96PV7 902 aaPredicted RBP10.57□□□□□ -0.72
SFXN1-205ENST00000506963 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 PCIF1Q9H4Z3 704 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 RBAKQ9NYW8 714 aaPredicted RBP10.57□□□□□ -0.72
SFXN1-205ENST00000506963 SPG21Q9NZD8 308 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 DNAJB4Q9UDY4 337 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 UBQLN1Q9UMX0 589 aaKnown RBP10.57□□□□□ -0.72
SFXN1-205ENST00000506963 MAPK8IP1Q9UQF2 711 aa10.57□□□□□ -0.72
SFXN1-205ENST00000506963 COL4A4P53420 1690 aaPredicted RBP10.57□□□□□ -0.72
SFXN1-205ENST00000506963 MYO7AQ13402 2215 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 PLXNA4Q9HCM2 1894 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 NRP1O14786 923 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 CLIC2O15247 247 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 EXOC3O60645 756 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 ZC3H11AO75152 810 aaKnown RBP eCLIP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 FGF18O76093 207 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 ITGB1P05556 798 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 PAX3P23760 479 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 RPL9P32969 192 aaKnown RBP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 CLDN10P78369 228 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 SOX4Q06945 474 aaPredicted RBP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 PSMD6Q15008 389 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 UPP1Q16831 310 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 GLRA4Q5JXX5 417 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 SPOUT1Q5T280 376 aaKnown RBP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 SPATA1Q5VX52 437 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 DDX53Q86TM3 631 aaKnown RBP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 CBWD2Q8IUF1 395 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 GPR65Q8IYL9 337 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 MLKLQ8NB16 471 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 SPPL3Q8TCT6 385 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 COLEC11Q9BWP8 271 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 MARCH5Q9NX47 278 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 FAN1Q9Y2M0 1017 aa10.56□□□□□ -0.72
SFXN1-205ENST00000506963 PRRC2BQ5JSZ5 2229 aaKnown RBP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 LAMA2P24043 3122 aaKnown RBP10.56□□□□□ -0.72
SFXN1-205ENST00000506963 BICDL2A1A5D9 508 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 GOLGA8IPA6NC78 632 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 GOLGA8JA6NMD2 632 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 BIN1O00499 593 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 NR2F2P24468 414 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 CYP2J2P51589 502 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 PMS1P54277 932 aaKnown RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 WNT7BP56706 349 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 FKBP3Q00688 224 aaKnown RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 KRT17Q04695 432 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 CYP24A1Q07973 514 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 GPM6BQ13491 265 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 CAMK1Q14012 370 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 TMEM132DQ14C87 1099 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 ANKRD40Q6AI12 368 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 PDE12Q6L8Q7 609 aaKnown RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 TTI2Q6NXR4 508 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 DCLRE1AQ6PJP8 1040 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 TMEM173Q86WV6 379 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 EFCAB13Q8IY85 973 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 TMC2Q8TDI7 906 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 BCL7CQ8WUZ0 217 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 SYAP1Q96A49 352 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 KIF12Q96FN5 646 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 GUCD1Q96NT3 240 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 TSG101Q99816 390 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
SFXN1-205ENST00000506963 CERS4Q9HA82 394 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 TMEM63CQ9P1W3 806 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 MTUS1Q9ULD2 1270 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
SFXN1-205ENST00000506963 ATG2AQ2TAZ0 1938 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 ANO9A1A5B4 782 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CASTOR2A6NHX0 329 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PIRO00625 290 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 FSCN2O14926 492 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CETN3O15182 167 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 GRM6O15303 877 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 SLC16A3O15427 465 aaKnown RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 AKAP3O75969 853 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 NFICP08651 508 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 ERCC5P28715 1186 aaPredicted RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PSMC2P35998 433 aaKnown RBP10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PBX3P40426 434 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 OR1G1P47890 313 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 CASP4P49662 377 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 NLRP12P59046 1061 aa10.54□□□□□ -0.72
SFXN1-205ENST00000506963 PAK1Q13153 545 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms