RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 DDX53Q86TM3 631 aaKnown RBP19.78■□□□□ 0.76
NPHP4-210ENST00000506941 ELOA2Q8IYF1 753 aaPredicted RBP19.78■□□□□ 0.76
NPHP4-210ENST00000506941 CCDC47Q96A33 483 aaKnown RBP19.78■□□□□ 0.76
NPHP4-210ENST00000506941 FAM213AQ9BRX8 229 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 LMBRD1Q9NUN5 540 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 TUBGCP4Q9UGJ1 667 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 PCDHA5Q9Y5H7 936 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 TSC2P49815 1807 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 CLIC2O15247 247 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 KIF4AO95239 1232 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 HSP90AA2PQ14568 343 aaPredicted RBP19.77■□□□□ 0.76
NPHP4-210ENST00000506941 TIGD5Q53EQ6 642 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 TCEAL5Q5H9L2 206 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 ADGRD2Q7Z7M1 963 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 SMYD4Q8IYR2 804 aaPredicted RBP19.77■□□□□ 0.76
NPHP4-210ENST00000506941 FAM212AQ96EL1 285 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 ZBP1Q9H171 429 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 KCTD10Q9H3F6 313 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 NSUN3Q9H649 340 aaKnown RBP19.77■□□□□ 0.76
NPHP4-210ENST00000506941 HSPBP1Q9NZL4 362 aa19.77■□□□□ 0.76
NPHP4-210ENST00000506941 MTCL1Q9Y4B5 1905 aaKnown RBP19.76■□□□□ 0.75
NPHP4-210ENST00000506941 EXTL3O43909 919 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 NFICP08651 508 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 CLCNKBP51801 687 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 ZBTB6Q15916 424 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 UPP1Q16831 310 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 PLPP4Q5VZY2 271 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 JADE1Q6IE81 842 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 RNF168Q8IYW5 571 aaPredicted RBP19.76■□□□□ 0.75
NPHP4-210ENST00000506941 VPS52Q8N1B4 723 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 GPD1LQ8N335 351 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 C3orf58Q8NDZ4 430 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 HASPINQ8TF76 798 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 SMARCE1Q969G3 411 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 KIF12Q96FN5 646 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 GBP4Q96PP9 640 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 GSDMAQ96QA5 445 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 TCF25Q9BQ70 676 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 COLEC11Q9BWP8 271 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 ENTPD7Q9NQZ7 604 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 SLC38A7Q9NVC3 462 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 PUF60Q9UHX1 559 aaKnown RBP19.76■□□□□ 0.75
NPHP4-210ENST00000506941 HOOK1Q9UJC3 728 aaKnown RBP19.76■□□□□ 0.75
NPHP4-210ENST00000506941 ADAM28Q9UKQ2 775 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 MAPK8IP1Q9UQF2 711 aa19.76■□□□□ 0.75
NPHP4-210ENST00000506941 SMC2O95347 1197 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 LDHAP00338 332 aaKnown RBP19.75■□□□□ 0.75
NPHP4-210ENST00000506941 GUCY2FP51841 1108 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 CD300LGQ6UXG3 332 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 HS2ST1Q7LGA3 356 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 TAS1R1Q7RTX1 841 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 BRSK2Q8IWQ3 736 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 NOC3LQ8WTT2 800 aaKnown RBP19.75■□□□□ 0.75
NPHP4-210ENST00000506941 AUTS2Q8WXX7 1259 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 UROC1Q96N76 676 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 GPR62Q9BZJ7 368 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 RMND1Q9NWS8 449 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 C5orf42Q9H799 3197 aa19.75■□□□□ 0.75
NPHP4-210ENST00000506941 HIDE1A8MVS5 230 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 KIAA0391O15091 583 aaKnown RBP19.74■□□□□ 0.75
NPHP4-210ENST00000506941 GTF2F1P35269 517 aaKnown RBP eCLIP19.74■□□□□ 0.75
NPHP4-210ENST00000506941 CYP2J2P51589 502 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 SNRPFP62306 86 aaKnown RBP19.74■□□□□ 0.75
NPHP4-210ENST00000506941 POU5F1Q01860 360 aaKnown RBP19.74■□□□□ 0.75
NPHP4-210ENST00000506941 FUT10Q6P4F1 479 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 TMC7Q7Z402 723 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 CBWD2Q8IUF1 395 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 CD302Q8IX05 232 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 C12orf56Q8IXR9 622 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 EFCAB13Q8IY85 973 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 GUF1Q8N442 669 aaKnown RBP19.74■□□□□ 0.75
NPHP4-210ENST00000506941 MICAL1Q8TDZ2 1067 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 FBXL18Q96ME1 805 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 ASB7Q9H672 318 aa19.74■□□□□ 0.75
NPHP4-210ENST00000506941 RBAKQ9NYW8 714 aaPredicted RBP19.74■□□□□ 0.75
NPHP4-210ENST00000506941 CGNQ9P2M7 1197 aaKnown RBP19.74■□□□□ 0.75
NPHP4-210ENST00000506941 TMEM189-UBE2V1I3L0A0 370 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 PODXLO00592 558 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 SOD2P04179 222 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 CTSAP10619 480 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 HYAL1Q12794 435 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 TMEM132DQ14C87 1099 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 CAMK4Q16566 473 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 ZNF658Q5TYW1 1059 aaPredicted RBP19.73■□□□□ 0.75
NPHP4-210ENST00000506941 PDE12Q6L8Q7 609 aaKnown RBP19.73■□□□□ 0.75
NPHP4-210ENST00000506941 FAM84AQ96KN4 292 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 B3GALT6Q96L58 329 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 HERC2P3Q9BVR0 1158 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 NGRNQ9NPE2 291 aaKnown RBP19.73■□□□□ 0.75
NPHP4-210ENST00000506941 PRDM6Q9NQX0 595 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 MAN1B1Q9UKM7 699 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 UBQLN1Q9UMX0 589 aaKnown RBP19.73■□□□□ 0.75
NPHP4-210ENST00000506941 DERAQ9Y315 318 aa19.73■□□□□ 0.75
NPHP4-210ENST00000506941 C2orf71A6NGG8 1288 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 PDXKO00764 312 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 TADA2AO75478 443 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 IL18RAPO95256 599 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 CYP3A5P20815 502 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 PRCPP42785 496 aa19.72■□□□□ 0.75
NPHP4-210ENST00000506941 SMC1AQ14683 1233 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms