RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 BMT2Q1RMZ1 405 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 RBM23Q86U06 439 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 HASPINQ8TF76 798 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 HERC2P3Q9BVR0 1158 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 COLEC11Q9BWP8 271 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 GPR62Q9BZJ7 368 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 RPF1Q9H9Y2 349 aaKnown RBP19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 PLEKHA5Q9HAU0 1116 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 THEGQ9P2T0 379 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 TUBGCP4Q9UGJ1 667 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 ADAM28Q9UKQ2 775 aa19.87■□□□□ 0.77
PDLIM7-216ENST00000506537 C2orf71A6NGG8 1288 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 PER2O15055 1255 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 LINC01565O15544 149 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 TGFB1I1O43294 461 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 SOD2P04179 222 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 GARTP22102 1010 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 CLCNKBP51801 687 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 TFF2Q03403 129 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 PPP2R3AQ06190 1150 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 SMC1AQ14683 1233 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 POSTNQ15063 836 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 PTPN14Q15678 1187 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 CTC1Q2NKJ3 1217 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 FUT10Q6P4F1 479 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 CD300LGQ6UXG3 332 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 NELFCDQ8IXH7 590 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 MRPL43Q8N983 215 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 C3orf58Q8NDZ4 430 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 SAAL1Q96ER3 474 aa19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 IPO9Q96P70 1041 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 UBE2ZQ9H832 354 aaPredicted RBP19.86■□□□□ 0.77
PDLIM7-216ENST00000506537 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 WNT7BP56706 349 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 PNOCQ13519 176 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 ZBTB6Q15916 424 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 DUSP6Q16828 381 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 UPP1Q16831 310 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 VN1R2Q8NFZ6 395 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 HLA-CQ95604 372 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 PABPC5Q96DU9 382 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 B3GALT6Q96L58 329 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 UROC1Q96N76 676 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 PCIF1Q9H4Z3 704 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 IGFLR1Q9H665 355 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 TLE6Q9H808 572 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 SLC38A7Q9NVC3 462 aa19.85■□□□□ 0.77
PDLIM7-216ENST00000506537 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 TMEM189-UBE2V1I3L0A0 370 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 LILRB3O75022 631 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 RHOBTB3O94955 611 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 CXCL14O95715 111 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 GLP2RO95838 553 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 NFICP08651 508 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 LTBRP36941 435 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 RBM10P98175 930 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 ARMCX5Q6P1M9 558 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 EFHBQ8N7U6 833 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 PPP2R3CQ969Q6 453 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 KIF12Q96FN5 646 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 FAM213AQ9BRX8 229 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 AGPAT3Q9NRZ7 376 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 CLDND1Q9NY35 253 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 STK39Q9UEW8 545 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 COG5Q9UP83 839 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 IRAK3Q9Y616 596 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 VWA8A3KMH1 1905 aa19.84■□□□□ 0.77
PDLIM7-216ENST00000506537 SF3B1O75533 1304 aaKnown RBP eCLIP19.83■□□□□ 0.774e-7■■■■■ 44.1
PDLIM7-216ENST00000506537 GOLGA8IPA6NC78 632 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 GOLGA8JA6NMD2 632 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 PODXLO00592 558 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 TBX10O75333 385 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 TADA2AO75478 443 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 CA8P35219 290 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 GUCY2FP51841 1108 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 DLX2Q07687 328 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 PSMD2Q13200 908 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 ADAM15Q13444 863 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 JADE1Q6IE81 842 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 KANK3Q6NY19 840 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 BRSK2Q8IWQ3 736 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 FAM212AQ96EL1 285 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 CHST7Q9NS84 486 aa19.83■□□□□ 0.77
PDLIM7-216ENST00000506537 VCANP13611 3396 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 EXTL3O43909 919 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 CLASP2O75122 1294 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 B3GAT3O94766 335 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 GLUD2P49448 558 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 POU5F1Q01860 360 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 DSG1Q02413 1049 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 KCNC3Q14003 757 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 KCNB1Q14721 858 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 KNOP1Q1ED39 458 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 KIAA0319Q5VV43 1072 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 DCLRE1AQ6PJP8 1040 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 CD302Q8IX05 232 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 ERCC4Q92889 916 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 TIGD1Q96MW7 591 aa19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 CDCA3Q99618 268 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-216ENST00000506537 HSPBP1Q9NZL4 362 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms