RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MTFMTQ96DP5 389 aaKnown RBP7.43□□□□□ -1.22
HERC4-213ENST00000506515 OR14A2Q96R54 314 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 MRI1Q9BV20 369 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 PLA2G12BQ9BX93 195 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 MEGF9Q9H1U4 602 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 KCNH6Q9H252 994 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 FEZ2Q9UHY8 353 aaPredicted RBP7.43□□□□□ -1.22
HERC4-213ENST00000506515 PCDHA1Q9Y5I3 950 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 IFT140Q96RY7 1462 aa7.43□□□□□ -1.22
HERC4-213ENST00000506515 RIMBP3CA6NJZ7 1639 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 RIMBP3BA6NNM3 1639 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 RIMBP3Q9UFD9 1639 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 CXorf49A8MYA2 514 aaPredicted RBP7.42□□□□□ -1.22
HERC4-213ENST00000506515 PMM2O15305 246 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 ATP5JP18859 108 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 CACNB3P54284 484 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 RHBDL3P58872 404 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 PICALMQ13492 652 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 FGL2Q14314 439 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 GRM7Q14831 915 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 ATP2B3Q16720 1220 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 SLFN13Q68D06 897 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 ANKS6Q68DC2 871 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 PLXDC1Q8IUK5 500 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 FAM167AQ96KS9 214 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 ZNF512Q96ME7 567 aaPredicted RBP7.42□□□□□ -1.22
HERC4-213ENST00000506515 APOL5Q9BWW9 433 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 C11orf54Q9H0W9 315 aaPredicted RBP7.42□□□□□ -1.22
HERC4-213ENST00000506515 NELFAQ9H3P2 528 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 ZMAT3Q9HA38 289 aaKnown RBP7.42□□□□□ -1.22
HERC4-213ENST00000506515 CPA4Q9UI42 421 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 MROH2BQ7Z745 1585 aa7.42□□□□□ -1.22
HERC4-213ENST00000506515 F2RL2O00254 374 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 GOLIM4O00461 696 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 KIAA0391O15091 583 aaKnown RBP7.41□□□□□ -1.22
HERC4-213ENST00000506515 PQBP1O60828 265 aaKnown RBP7.41□□□□□ -1.22
HERC4-213ENST00000506515 CD1AP06126 327 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 PHKG2P15735 406 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 PEX2P28328 305 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 RAP2BP61225 183 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 GPSM2P81274 684 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 C1orf43Q9BWL3 253 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 WDCPQ9H6R7 721 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 SLC23A1Q9UHI7 598 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 HDAC5Q9UQL6 1122 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 ARHGEF11O15085 1522 aa7.41□□□□□ -1.22
HERC4-213ENST00000506515 TCRBV7S2A1N4TA0A589 114 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 ANO9A1A5B4 782 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 NPEPPSL1A6NEC2 478 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 OTOL1A6NHN0 477 aaPredicted RBP7.4□□□□□ -1.22
HERC4-213ENST00000506515 NT5C1B-RDH14C9J2C7 533 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 GRM6O15303 877 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 MYL3P08590 195 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 SBK3P0C264 359 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 RPS19P39019 145 aaKnown RBP7.4□□□□□ -1.22
HERC4-213ENST00000506515 DUSP8Q13202 625 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 SEMA5AQ13591 1074 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 BRD3Q15059 726 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 OTUD7BQ6GQQ9 843 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 ZNF529Q6P280 563 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 UBE3BQ7Z3V4 1068 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 SVIPQ8NHG7 77 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 LRTOMTQ8WZ04 291 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 KCNC2Q96PR1 638 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 MPHOSPH6Q99547 160 aaKnown RBP7.4□□□□□ -1.22
HERC4-213ENST00000506515 ZCCHC4Q9H5U6 513 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 SARS2Q9NP81 518 aaKnown RBP7.4□□□□□ -1.22
HERC4-213ENST00000506515 SLAMF7Q9NQ25 335 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 PLA2G3Q9NZ20 509 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 PPP4R1LQ9P1A2 415 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 PCDHA6Q9UN73 950 aa7.4□□□□□ -1.22
HERC4-213ENST00000506515 RSF1Q96T23 1441 aaPredicted RBP7.4□□□□□ -1.22
HERC4-213ENST00000506515 A0A1W2PPL8 197 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 MGEA5O60502 916 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 SNRPA1P09661 255 aaKnown RBP7.39□□□□□ -1.23
HERC4-213ENST00000506515 PRDX5P30044 214 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 KHDC1LQ5JSQ8 128 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 APOA5Q6Q788 366 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 LCNL1Q6ZST4 164 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 PPP1R3BQ86XI6 285 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 CELF5Q8N6W0 485 aaKnown RBP7.39□□□□□ -1.23
HERC4-213ENST00000506515 PARD3BQ8TEW8 1205 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 TNPO1Q92973 898 aaKnown RBP7.39□□□□□ -1.23
HERC4-213ENST00000506515 CPPED1Q9BRF8 314 aaPredicted RBP7.39□□□□□ -1.23
HERC4-213ENST00000506515 C22orf23Q9BZE7 217 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 ADAM7Q9H2U9 754 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 ATP6V0A4Q9HBG4 840 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 MSL2Q9HCI7 577 aa7.39□□□□□ -1.23
HERC4-213ENST00000506515 PNPLA7Q6ZV29 1317 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 TBKBP1A7MCY6 615 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 B5MCH6 92 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 AHSGP02765 367 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 IFIT2P09913 472 aaKnown RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 FTH1P19P0C7X4 201 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 KITP10721 976 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 GNAT2P19087 354 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 MSX2P35548 267 aaPredicted RBP7.38□□□□□ -1.23
HERC4-213ENST00000506515 CLRN1P58418 232 aa7.38□□□□□ -1.23
HERC4-213ENST00000506515 BIRC2Q13490 618 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms