RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 GPR65Q8IYL9 337 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 IQUBQ8NA54 791 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 SUSD6Q92537 303 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 HVCN1Q96D96 273 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 FBXL18Q96ME1 805 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 MSTO1Q9BUK6 570 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 LRRC27Q9C0I9 530 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 RXFP1Q9HBX9 757 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.96■□□□□ 0.31
MED28-204ENST00000506409 TBC1D7Q9P0N9 293 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 RCOR1Q9UKL0 485 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 ZDHHC9Q9Y397 364 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 A0A0B4J269 797 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 C19orf67A6NJJ6 358 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 SPDYE4A6NLX3 237 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 OGTO15294 1046 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 TNFSF9P41273 254 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 CREMQ03060 361 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 ITIH3Q06033 890 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 CBX2Q14781 532 aaPredicted RBP16.95■□□□□ 0.3
MED28-204ENST00000506409 HERC4Q5GLZ8 1057 aaPredicted RBP16.95■□□□□ 0.3
MED28-204ENST00000506409 RTP2Q5QGT7 225 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 SLC39A4Q6P5W5 647 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 CEP57Q86XR8 500 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 STAMQ92783 540 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 DDX27Q96GQ7 796 aaKnown RBP16.95■□□□□ 0.3
MED28-204ENST00000506409 TTPALQ9BTX7 342 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 ADAM7Q9H2U9 754 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 OLFML3Q9NRN5 406 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 PANK4Q9NVE7 773 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 KBTBD4Q9NVX7 518 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
MED28-204ENST00000506409 FRMD3A2A2Y4 597 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 FAM189A1O60320 539 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 PPP1R37O75864 691 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 GCNT3O95395 438 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 GLUD1P00367 558 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 KRT85P78386 507 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 AMPD3Q01432 767 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 PPP2R3AQ06190 1150 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 ZBTB41Q5SVQ8 909 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 RARS2Q5T160 578 aaKnown RBP16.94■□□□□ 0.3
MED28-204ENST00000506409 RESP18Q5W5W9 173 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 SLFN12LQ6IEE8 588 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 PRSS55Q6UWB4 352 aaPredicted RBP16.94■□□□□ 0.3
MED28-204ENST00000506409 CCDC65Q8IXS2 484 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 C12orf76Q8N812 135 aaPredicted RBP16.94■□□□□ 0.3
MED28-204ENST00000506409 C3orf58Q8NDZ4 430 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 C18orf25Q96B23 403 aaPredicted RBP16.94■□□□□ 0.3
MED28-204ENST00000506409 PHF7Q9BWX1 381 aaPredicted RBP16.94■□□□□ 0.3
MED28-204ENST00000506409 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
MED28-204ENST00000506409 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
MED28-204ENST00000506409 TTC26A0AVF1 554 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 TISP43B9A030 160 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 ANKRD63C9JTQ0 380 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 PODXLO00592 558 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 POLR2DO15514 142 aaKnown RBP16.93■□□□□ 0.3
MED28-204ENST00000506409 TRAPPC3O43617 180 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 IGFBP6P24592 240 aaPredicted RBP16.93■□□□□ 0.3
MED28-204ENST00000506409 RPL9P32969 192 aaKnown RBP16.93■□□□□ 0.3
MED28-204ENST00000506409 SPAG1Q07617 926 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 ALCAMQ13740 583 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 L1TD1Q5T7N2 865 aaKnown RBP16.93■□□□□ 0.3
MED28-204ENST00000506409 ADALQ6DHV7 355 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 ELMSAN1Q6PJG2 1045 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.93■□□□□ 0.3
MED28-204ENST00000506409 GLYCTKQ8IVS8 523 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 PIK3R5Q8WYR1 880 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 KHSRPQ92945 711 aaKnown RBP eCLIP16.93■□□□□ 0.3
MED28-204ENST00000506409 ACCSQ96QU6 501 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 STRA6Q9BX79 667 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 TRIM9Q9C026 710 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 SFXN1Q9H9B4 322 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 MAGEF1Q9HAY2 307 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 MAN1C1Q9NR34 630 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 DPP7Q9UHL4 492 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 CDH22Q9UJ99 828 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 EXOC7Q9UPT5 735 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 PCDHB13Q9Y5F0 798 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 ATP6V1DQ9Y5K8 247 aa16.93■□□□□ 0.3
MED28-204ENST00000506409 WEE2P0C1S8 567 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 MYBP10242 640 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 RPL17P18621 184 aaKnown RBP16.92■□□□□ 0.3
MED28-204ENST00000506409 CASP5P51878 434 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 ASIC1P78348 528 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 KCNA1Q09470 495 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 ENOX2Q16206 610 aaKnown RBP16.92■□□□□ 0.3
MED28-204ENST00000506409 PSMD5Q16401 504 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 KANK3Q6NY19 840 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 PDXDC1Q6P996 788 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 CD300LGQ6UXG3 332 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 TMC5Q6UXY8 1006 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 PALB2Q86YC2 1186 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 LNX1Q8TBB1 728 aaPredicted RBP16.92■□□□□ 0.3
MED28-204ENST00000506409 LEO1Q8WVC0 666 aaPredicted RBP16.92■□□□□ 0.3
MED28-204ENST00000506409 KIF12Q96FN5 646 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 CHAMP1Q96JM3 812 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
MED28-204ENST00000506409 SPATA32Q96LK8 384 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms