RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 CIZ1Q9ULV3 898 aaPredicted RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 PCDHB13Q9Y5F0 798 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 IRAK3Q9Y616 596 aa19.46■□□□□ 0.71
SMN1-204ENST00000506163 TCF20Q9UGU0 1960 aaKnown RBP19.46■□□□□ 0.71
SMN1-204ENST00000506163 LACTBL1A8MY62 500 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 CLASP2O75122 1294 aaKnown RBP19.45■□□□□ 0.7
SMN1-204ENST00000506163 ABCD1P33897 745 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 ACOT2P49753 483 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 CLCNKBP51801 687 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 UPP1Q16831 310 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 FUT10Q6P4F1 479 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 C3orf58Q8NDZ4 430 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 HERC2P3Q9BVR0 1158 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 CHST7Q9NS84 486 aa19.45■□□□□ 0.7
SMN1-204ENST00000506163 PVALEFA0A1B0GWK0 134 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 NCK2O43639 380 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 NR1I2O75469 434 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 ZNF202O95125 648 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 PRR29P0C7W0 189 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 ZBTB6Q15916 424 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 LEXMQ3ZCV2 418 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 FAM26FQ5R3K3 315 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 KIAA0319Q5VV43 1072 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 USP25Q9UHP3 1055 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 AGO2Q9UKV8 859 aaKnown RBP19.44■□□□□ 0.7
SMN1-204ENST00000506163 BARX2Q9UMQ3 279 aaPredicted RBP19.44■□□□□ 0.7
SMN1-204ENST00000506163 TTC28Q96AY4 2481 aa19.44■□□□□ 0.7
SMN1-204ENST00000506163 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.43■□□□□ 0.7
SMN1-204ENST00000506163 TADA2AO75478 443 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 ALCAMQ13740 583 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 CLUL1Q15846 466 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 SLFN12LQ6IEE8 588 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 KRBA2Q6ZNG9 492 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 ZNF507Q8TCN5 953 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 SCFD1Q8WVM8 642 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 PPP2R3CQ969Q6 453 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 MSLNLQ96KJ4 702 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 CDCA3Q99618 268 aaPredicted RBP19.43■□□□□ 0.7
SMN1-204ENST00000506163 CBWD1Q9BRT8 395 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 PLEKHA5Q9HAU0 1116 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 SLC39A2Q9NP94 309 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 TUBGCP4Q9UGJ1 667 aa19.43■□□□□ 0.7
SMN1-204ENST00000506163 PDCD11Q14690 1871 aaKnown RBP19.43■□□□□ 0.7
SMN1-204ENST00000506163 C2CD2LO14523 706 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 CNPP09543 421 aaKnown RBP19.42■□□□□ 0.7
SMN1-204ENST00000506163 CA8P35219 290 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 WNT7BP56706 349 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 DSG1Q02413 1049 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 KMT5BQ4FZB7 885 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 TJAP1Q5JTD0 557 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 DCLRE1AQ6PJP8 1040 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 ENGASEQ8NFI3 743 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 POMGNT1Q8WZA1 660 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 KLHL5Q96PQ7 755 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 RPF1Q9H9Y2 349 aaKnown RBP19.42■□□□□ 0.7
SMN1-204ENST00000506163 EXOC7Q9UPT5 735 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 C5orf42Q9H799 3197 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 TMEM189-UBE2V1I3L0A0 370 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 B3GAT3O94766 335 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
SMN1-204ENST00000506163 GUCY2FP51841 1108 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 STK4Q13043 487 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 SNW1Q13573 536 aaKnown RBP19.42■□□□□ 0.7
SMN1-204ENST00000506163 KYAT1Q16773 422 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 RTP2Q5QGT7 225 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 LLGL2Q6P1M3 1020 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 TMEM184AQ6ZMB5 413 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 SYCP3Q8IZU3 236 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 FMR1NBQ8N0W7 255 aaPredicted RBP19.42■□□□□ 0.7
SMN1-204ENST00000506163 FEZF2Q8TBJ5 459 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 SLC22A17Q8WUG5 538 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 SAAL1Q96ER3 474 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 COL25A1Q9BXS0 654 aaPredicted RBP19.42■□□□□ 0.7
SMN1-204ENST00000506163 PCIF1Q9H4Z3 704 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 SLC38A7Q9NVC3 462 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 HCFC2Q9Y5Z7 792 aa19.42■□□□□ 0.7
SMN1-204ENST00000506163 ANK1P16157 1881 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 VWA8A3KMH1 1905 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 I3L4J1 428 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 PODXLO00592 558 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 EIF3DO15371 548 aaKnown RBP eCLIP19.41■□□□□ 0.7
SMN1-204ENST00000506163 TGFB1I1O43294 461 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 BRCC3P46736 316 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 GLUD2P49448 558 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 NDUFV1P49821 464 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 DPYDQ12882 1025 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 POSTNQ15063 836 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 FAM171A1Q5VUB5 890 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 JADE1Q6IE81 842 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 KIAA0895Q8NCT3 520 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 FAM212AQ96EL1 285 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 KIF12Q96FN5 646 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 TMEM206Q9H813 350 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 MRPL17Q9NRX2 175 aaKnown RBP19.41■□□□□ 0.7
SMN1-204ENST00000506163 STK39Q9UEW8 545 aa19.41■□□□□ 0.7
SMN1-204ENST00000506163 GOLGA8IPA6NC78 632 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 GOLGA8JA6NMD2 632 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 TEX28O15482 410 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 GADD45BO75293 160 aaPredicted RBP19.4■□□□□ 0.7
SMN1-204ENST00000506163 NFICP08651 508 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms