RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 WDR49Q8IV35 697 aa16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 TDHQ8IZJ6 230 aa16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 RNF169Q8NCN4 708 aa16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 CGRRF1Q99675 332 aa16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 CWH43Q9H720 699 aa16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 INTS13Q9NVM9 706 aa16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.79■□□□□ 0.28
GAPDHP40-201ENST00000505218 UPP2O95045 317 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 NFICP08651 508 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 EEF1GP26641 437 aaKnown RBP16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 LRPAP1P30533 357 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 GTF2H1P32780 548 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 VAMP7P51809 220 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 SOX4Q06945 474 aaPredicted RBP16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 COLGALT2Q8IYK4 626 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 OR5B17Q8NGF7 314 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 CNOT6LQ96LI5 555 aaKnown RBP16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 MRPL9Q9BYD2 267 aaKnown RBP16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 ARMCX3Q9UH62 379 aaPredicted RBP16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 INSL6Q9Y581 213 aa16.78■□□□□ 0.28
GAPDHP40-201ENST00000505218 ANO9A1A5B4 782 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 TBKBP1A7MCY6 615 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 DDHD2O94830 711 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 C4BPAP04003 597 aaKnown RBP16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 THP07101 528 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 AP3M2P53677 418 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 PPP3CAQ08209 521 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 TCP11X2Q5H9J9 407 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 CHRDL2Q6WN34 429 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 LUZP1Q86V48 1076 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 ZNF280BQ86YH2 543 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 NRDE2Q9H7Z3 1164 aa16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 LIMA1Q9UHB6 759 aaKnown RBP16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 UBQLN1Q9UMX0 589 aaKnown RBP16.77■□□□□ 0.28
GAPDHP40-201ENST00000505218 RALGAPA2Q2PPJ7 1873 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 EFEMP2O95967 443 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 POMCP01189 267 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 TUSC3Q13454 348 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 TMEM132DQ14C87 1099 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 ZACNQ401N2 412 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 MIIPQ5JXC2 388 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 GLRA4Q5JXX5 417 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 SCARA3Q6AZY7 606 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 CD300LGQ6UXG3 332 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 FAM114A1Q8IWE2 563 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 LRRC43Q8N309 656 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 C1orf127Q8N9H9 656 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 URGCPQ8TCY9 931 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 KIF12Q96FN5 646 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 FAM84AQ96KN4 292 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 TMEM175Q9BSA9 504 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 SLC38A7Q9NVC3 462 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 SIX4Q9UIU6 781 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 COQ4Q9Y3A0 265 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 PCDHA11Q9Y5I1 949 aa16.76■□□□□ 0.27
GAPDHP40-201ENST00000505218 GRXCR1A8MXD5 290 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 KCNJ18B7U540 433 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 PIRO00625 290 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 TRIM49P0CI25 452 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 TRIM49CP0CI26 452 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 KRT13P13646 458 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 SPAG1Q07617 926 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 KCNJ12Q14500 433 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 TPD52L1Q16890 204 aaPredicted RBP16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 DUOXA2Q1HG44 320 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 PRPF38BQ5VTL8 546 aaKnown RBP16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 SV2AQ7L0J3 742 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 ABI1Q8IZP0 508 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 TMEM130Q8N3G9 435 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 CCDC127Q96BQ5 260 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 FNBP1Q96RU3 617 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 RPS6KC1Q96S38 1066 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 HCSTQ9UBK5 93 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 TUBGCP4Q9UGJ1 667 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 INPP5FQ9Y2H2 1132 aa16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 MRPL42Q9Y6G3 142 aaKnown RBP16.75■□□□□ 0.27
GAPDHP40-201ENST00000505218 ANK1P16157 1881 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 FNDC1Q4ZHG4 1894 aaPredicted RBP16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 LCHNA4D1U4 455 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 TMEM189-UBE2V1I3L0A0 370 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 TLL1O43897 1013 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 ARHGEF15O94989 841 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 VNN1O95497 513 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 DLATP10515 647 aaKnown RBP16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 ATP1A3P13637 1013 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 RPL9P32969 192 aaKnown RBP16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 RABGGTBP53611 331 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 SMAD3P84022 425 aaKnown RBP16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 KRT31Q15323 416 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 UPP1Q16831 310 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 LRIT3Q3SXY7 679 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 TDRD10Q5VZ19 366 aaKnown RBP16.74■□□□□ 0.27
GAPDHP40-201ENST00000505218 LMBRD2Q68DH5 695 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms