RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 MSNP26038 577 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 GRM5P41594 1212 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 CDK7P50613 346 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 PTPN11Q06124 597 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 PTK7Q13308 1070 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 RAPGEF1Q13905 1077 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 MBTPS1Q14703 1052 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 DRAP1Q14919 205 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 PCBP1Q15365 356 aaKnown RBP eCLIP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 SLC9C1Q4G0N8 1177 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 FAM26DQ5JW98 314 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 SPOPLQ6IQ16 392 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 SLC27A1Q6PCB7 646 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 CYP26C1Q6V0L0 522 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 NYAP1Q6ZVC0 841 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 CACNA2D4Q7Z3S7 1137 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 TMTC1Q8IUR5 882 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 WDR49Q8IV35 697 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 ARRDC4Q8NCT1 418 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 FBXL13Q8NEE6 735 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 SYN2Q92777 582 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 TATDN2Q93075 761 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 GLT1D1Q96MS3 346 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 ZMAT2Q96NC0 199 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 DEFB118Q96PH6 123 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 ARID3AQ99856 593 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 SYT11Q9BT88 431 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 TMEM121BQ9BXQ6 578 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 TRPV6Q9H1D0 765 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 NXF3Q9H4D5 531 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 NHEJ1Q9H9Q4 299 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 ERVK-5Q9HDB9 667 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 RAB20Q9NX57 234 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 TRMT1Q9NXH9 659 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 SIX4Q9UIU6 781 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 OGDHLQ9ULD0 1010 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 MYO6Q9UM54 1294 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 NENFQ9UMX5 172 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 TFR2Q9UP52 801 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 PPP2R2CQ9Y2T4 447 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 HES2Q9Y543 173 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.22
TOPBP1-203ENST00000503464 TET1Q8NFU7 2136 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 TDRD15B5MCY1 1934 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ALPK3Q96L96 1907 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 A0A0U1RQG5 324 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 MEIS3P2A8K0S8 358 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 FOXN3O00409 490 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 MGEA5O60502 916 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 NDUFA10O95299 355 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 LCA5LO95447 670 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 CST3P01034 146 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 TNNI1P19237 187 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ACO1P21399 889 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 AXLP30530 894 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 SOX5P35711 763 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 EIF4A3P38919 411 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 THPOP40225 353 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 PRKCIP41743 596 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ARHGAP25P42331 645 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 GUCY2FP51841 1108 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 POU5F1Q01860 360 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 DSC3Q14574 896 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 LPIN1Q14693 890 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ASIC2Q16515 512 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 TMEM132AQ24JP5 1023 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 DCAF4L1Q3SXM0 396 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 FBXO47Q5MNV8 452 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF618Q5T7W0 954 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 SFMBT2Q5VUG0 894 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 JADE1Q6IE81 842 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 NOTUMQ6P988 496 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ALKAL1Q6UXT8 129 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 TRAPPC11Q7Z392 1133 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF571Q7Z3V5 609 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 FAM126BQ8IXS8 530 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 UBR7Q8N806 425 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 SMG8Q8ND04 991 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF397Q8NF99 534 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 SHC3Q92529 594 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 FAM212AQ96EL1 285 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ZNF333Q96JL9 665 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 SNX27Q96L92 541 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 FNBP1Q96RU3 617 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 STK33Q9BYT3 514 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 CRISPLD2Q9H0B8 497 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 XYLT2Q9H1B5 865 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 RPF1Q9H9Y2 349 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 STARD7Q9NQZ5 370 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 SNTG2Q9NY99 539 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 ST3GAL5Q9UNP4 418 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 PIN4Q9Y237 131 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 NUB1Q9Y5A7 615 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 EPN1Q9Y6I3 576 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 MROH7Q68CQ1 1323 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 TSC2P49815 1807 aa7.45□□□□□ -1.22
TOPBP1-203ENST00000503464 SSU72P8A0A1W2PR75 194 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 RCCD1A6NED2 376 aa7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 EIF3CLB5ME19 914 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-203ENST00000503464 KBTBD13C9JR72 458 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms