RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NOCTQ9UK39 431 aaKnown RBP23.67■■□□□ 1.38
PTPN13-205ENST00000502971 HAS3O00219 553 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 PALMO75781 387 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 IL18RAPO95256 599 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 AKR1A1P14550 325 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 PSEN2P49810 448 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 THNSL1Q8IYQ7 743 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 LENG1Q96BZ8 264 aaPredicted RBP23.67■■□□□ 1.38
PTPN13-205ENST00000502971 FAM84AQ96KN4 292 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 SCLT1Q96NL6 688 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 BEGAINQ9BUH8 593 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 KATNAL1Q9BW62 490 aa23.67■■□□□ 1.38
PTPN13-205ENST00000502971 SMIM35A0A1B0GVV1 85 aa23.66■■□□□ 1.38
PTPN13-205ENST00000502971 MBLAC1A4D2B0 266 aaPredicted RBP23.66■■□□□ 1.38
PTPN13-205ENST00000502971 B4GALT4O60513 344 aa23.66■■□□□ 1.38
PTPN13-205ENST00000502971 TBXAS1P24557 533 aaPredicted RBP23.66■■□□□ 1.38
PTPN13-205ENST00000502971 PDE6CP51160 858 aa23.66■■□□□ 1.38
PTPN13-205ENST00000502971 CKAP4Q07065 602 aaKnown RBP23.66■■□□□ 1.38
PTPN13-205ENST00000502971 NCOA4Q13772 614 aa23.66■■□□□ 1.38
PTPN13-205ENST00000502971 NOP9Q86U38 636 aaKnown RBP23.66■■□□□ 1.38
PTPN13-205ENST00000502971 DHX38Q92620 1227 aaKnown RBP23.66■■□□□ 1.38
PTPN13-205ENST00000502971 RPF1Q9H9Y2 349 aaKnown RBP23.66■■□□□ 1.38
PTPN13-205ENST00000502971 KAT6AQ92794 2004 aa23.66■■□□□ 1.38
PTPN13-205ENST00000502971 CTAGE15A4D2H0 777 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 ANKRD62A6NC57 917 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 GPR25O00155 361 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 GNRH1P01148 92 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 CTAGE8P0CG41 777 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 CYP11B1P15538 503 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 TCP1P17987 556 aaKnown RBP23.65■■□□□ 1.38
PTPN13-205ENST00000502971 SMYD5Q6GMV2 418 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 CTAGE6Q86UF2 777 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 SLC47A2Q86VL8 602 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 CTAGE4Q8IX94 777 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 FAM212AQ96EL1 285 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 PPP1R16BQ96T49 567 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 IMPG2Q9BZV3 1241 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 PDZD7Q9H5P4 517 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 PUF60Q9UHX1 559 aaKnown RBP23.65■■□□□ 1.38
PTPN13-205ENST00000502971 HYOU1Q9Y4L1 999 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 NCANO14594 1321 aa23.65■■□□□ 1.38
PTPN13-205ENST00000502971 MYL3P08590 195 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 CLTAP09496 248 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 GZMAP12544 262 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 CHRNB2P17787 502 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 NOP2P46087 812 aaKnown RBP23.64■■□□□ 1.38
PTPN13-205ENST00000502971 BPIFB4P59827 614 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 CUL2Q13617 745 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 ARHGEF6Q15052 776 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 MFSD14CQ5VZR4 134 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 CTNNBL1Q8WYA6 563 aaPredicted RBP23.64■■□□□ 1.38
PTPN13-205ENST00000502971 RABGGTAQ92696 567 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 ISCUQ9H1K1 167 aa23.64■■□□□ 1.38
PTPN13-205ENST00000502971 GRID2IPA4D2P6 1211 aa23.64■■□□□ 1.37
PTPN13-205ENST00000502971 DUSP11O75319 330 aaKnown RBP23.64■■□□□ 1.37
PTPN13-205ENST00000502971 ERLIN2O94905 339 aa23.64■■□□□ 1.37
PTPN13-205ENST00000502971 KRT5P13647 590 aa23.64■■□□□ 1.37
PTPN13-205ENST00000502971 ARF4P18085 180 aaPredicted RBP23.64■■□□□ 1.37
PTPN13-205ENST00000502971 HOXD10P28358 340 aa23.64■■□□□ 1.37
PTPN13-205ENST00000502971 NOP14P78316 857 aaKnown RBP23.64■■□□□ 1.37
PTPN13-205ENST00000502971 CDR2Q01850 454 aa23.64■■□□□ 1.37
PTPN13-205ENST00000502971 RPGRIP1Q96KN7 1286 aa23.64■■□□□ 1.37
PTPN13-205ENST00000502971 ADAMTS10Q9H324 1103 aa23.64■■□□□ 1.37
PTPN13-205ENST00000502971 APOBEC3GQ9HC16 384 aaKnown RBP23.64■■□□□ 1.37
PTPN13-205ENST00000502971 TMCO5BA8MYB1 307 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 TSPAN1O60635 241 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 KPNA6O60684 536 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 SRGAP2O75044 1071 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 RTN2O75298 545 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 TNNC2P02585 160 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 ADAM17P78536 824 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 PCBP1Q15365 356 aaKnown RBP eCLIP23.63■■□□□ 1.37
PTPN13-205ENST00000502971 FSCN1Q16658 493 aaKnown RBP23.63■■□□□ 1.37
PTPN13-205ENST00000502971 SPOPLQ6IQ16 392 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 CDR2LQ86X02 465 aaPredicted RBP23.63■■□□□ 1.37
PTPN13-205ENST00000502971 DNAAF5Q86Y56 855 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 DNAJC5GQ8N7S2 189 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 RFFLQ8WZ73 363 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 ELMO3Q96BJ8 720 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 ANKRD36BP1Q96IX9 119 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 CALR3Q96L12 384 aaKnown RBP23.63■■□□□ 1.37
PTPN13-205ENST00000502971 TLR10Q9BXR5 811 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 GCOM2Q9BZD3 368 aaPredicted RBP23.63■■□□□ 1.37
PTPN13-205ENST00000502971 MTMR12Q9C0I1 747 aa23.63■■□□□ 1.37
PTPN13-205ENST00000502971 CSDE1O75534 798 aaKnown RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 ASS1P00966 412 aaKnown RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 TMEM191BP0C7N4 346 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 STAG3L1P0CL83 205 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 CYP2C9P11712 490 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 OSTNP61366 133 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 RBM10P98175 930 aaKnown RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 FMO1Q01740 532 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 SGSM1Q2NKQ1 1148 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 TEX35Q5T0J7 233 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 MEI1Q5TIA1 1274 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 ZNF677Q86XU0 584 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 PALB2Q86YC2 1186 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 GPR161Q8N6U8 529 aaKnown RBP23.62■■□□□ 1.37
PTPN13-205ENST00000502971 CEP120Q8N960 986 aa23.62■■□□□ 1.37
PTPN13-205ENST00000502971 TPCN2Q8NHX9 752 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms