RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 C14orf93Q9H972 538 aaKnown RBP4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TPSG1Q9NRR2 321 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ERVK13-1Q9NX77 482 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 DACT1Q9NYF0 836 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TNFRSF10DQ9UBN6 386 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZNF112Q9UJU3 913 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 TMCC3Q9ULS5 477 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 PADI4Q9UM07 663 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 LIMCH1Q9UPQ0 1083 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 CEP83Q9Y592 693 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 ASXL1Q8IXJ9 1541 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 METP08581 1390 aa4.9□□□□□ -1.63
HMGB1P21-201ENST00000502313 FAM135BQ49AJ0 1406 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 IFT172Q9UG01 1749 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 TRIM64A6NGJ6 449 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 TRIM64BA6NI03 449 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 LGALS16A8MUM7 142 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 WASH4PA8MWX3 477 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 MASP2O00187 686 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 IPO5O00410 1097 aaKnown RBP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 APOL1O14791 398 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 IRAK2O43187 625 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 USO1O60763 962 aaKnown RBP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZBED4O75132 1171 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 THP07101 528 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 HNRNPCP07910 306 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 HNRNPLP14866 589 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 FOSL1P15407 271 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 EDNRBP24530 442 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 PTX3P26022 381 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 CTNNA1P35221 906 aaKnown RBP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 MAN2A2P49641 1150 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 KRT83P78385 493 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 IRF9Q00978 393 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 PLIN5Q00G26 463 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 TEKQ02763 1124 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 KCNMA1Q12791 1236 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 GPR19Q15760 415 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 FAM110CQ1W6H9 321 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 FSTL4Q6MZW2 842 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZPBP2Q6X784 338 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 KCNK18Q7Z418 384 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLC51AQ86UW1 340 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 LRRTM4Q86VH4 590 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 OSTM1Q86WC4 334 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 CPOQ8IVL8 374 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 SHISA5Q8N114 240 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 GALNT15Q8N3T1 639 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 LZTR1Q8N653 840 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 APPL2Q8NEU8 664 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 KLHDC4Q8TBB5 520 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 RILPL2Q969X0 211 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC120Q96HB5 630 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC34Q96HJ3 373 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 CNPPD1Q9BV87 410 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 LSM14BQ9BX40 385 aaKnown RBP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 ANO3Q9BYT9 981 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 BTBD1Q9H0C5 482 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 CXorf56Q9H5V9 222 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 ARMT1Q9H993 441 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 SP110Q9HB58 689 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 SEMA3GQ9NS98 782 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 GULP1Q9UBP9 304 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 STAP2Q9UGK3 403 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLC13A4Q9UKG4 626 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 TMEM94Q12767 1356 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 DHX57Q6P158 1386 aaKnown RBP4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 PIK3C2GO75747 1445 aa4.89□□□□□ -1.63
HMGB1P21-201ENST00000502313 A0A1W2PQ45 241 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 A0A1W2PQY0 241 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 TMEM82A0PJX8 343 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC154A6NI56 674 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 B4DLN1 442 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 C22orf46C9J442 243 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ACKR2O00590 384 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 TRIM38O00635 465 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 WNT9AO14904 365 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 NPC1O15118 1278 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 HOXC11O43248 304 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 PLA2G6O60733 806 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 FUCA1P04066 466 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 H2AFB1P0C5Y9 115 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 H2AFB2P0C5Z0 115 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 PDE6AP16499 860 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ENPP1P22413 925 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 FPR2P25090 351 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ACTN2P35609 894 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 MMP14P50281 582 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 COPAP53621 1224 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 CLNS1AP54105 237 aaKnown RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 DRG2P55039 364 aaKnown RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 JAM2P57087 298 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 PRKCQQ04759 706 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 SMAD1Q15797 465 aaKnown RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLC35G1Q2M3R5 365 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ARL13BQ3SXY8 428 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 MBLAC2Q68D91 279 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 CEP128Q6ZU80 1094 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 MOGAT3Q86VF5 341 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 AFAP1L1Q8TED9 768 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms