RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 HASPINQ8TF76 798 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 NOC3LQ8WTT2 800 aaKnown RBP12.78□□□□□ -0.36
MRPL55-234ENST00000497758 AUTS2Q8WXX7 1259 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
MRPL55-234ENST00000497758 ZMAT2Q96NC0 199 aaKnown RBP12.78□□□□□ -0.36
MRPL55-234ENST00000497758 PAAF1Q9BRP4 392 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 HERC2P3Q9BVR0 1158 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 EMILIN2Q9BXX0 1053 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 IKZF4Q9H2S9 585 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 STYXL1Q9Y6J8 313 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 UBE4BO95155 1302 aa12.78□□□□□ -0.36
MRPL55-234ENST00000497758 TTC26A0AVF1 554 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 LACTBL1A8MY62 500 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 C2CD2LO14523 706 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 XPOTO43592 962 aaKnown RBP12.77□□□□□ -0.37
MRPL55-234ENST00000497758 FAM189A1O60320 539 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 B3GAT3O94766 335 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 RPN1P04843 607 aaKnown RBP12.77□□□□□ -0.37
MRPL55-234ENST00000497758 GARTP22102 1010 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 ADSSP30520 456 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 CLCNKBP51801 687 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 PTPN14Q15678 1187 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 USP41Q3LFD5 358 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 ARMCX5Q6P1M9 558 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 DCLRE1AQ6PJP8 1040 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 HS2ST1Q7LGA3 356 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 CD302Q8IX05 232 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 C18orf25Q96B23 403 aaPredicted RBP12.77□□□□□ -0.37
MRPL55-234ENST00000497758 ASB2Q96Q27 587 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 TSPAN18Q96SJ8 248 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 FAM213AQ9BRX8 229 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 GOLGA2P5Q9HBQ8 144 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 SLC39A2Q9NP94 309 aa12.77□□□□□ -0.37
MRPL55-234ENST00000497758 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.37
MRPL55-234ENST00000497758 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 H3BQ06 376 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 DLL1O00548 723 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 PODXLO00592 558 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 LINC01565O15544 149 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 MEFVO15553 781 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 TRAPPC3O43617 180 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 LDHAP00338 332 aaKnown RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 SPAG1Q07617 926 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 EHHADHQ08426 723 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 PSMD2Q13200 908 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 ADAM15Q13444 863 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 TMEM132DQ14C87 1099 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 UPP1Q16831 310 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 CTC1Q2NKJ3 1217 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 EPM2AIP1Q7L775 607 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 TAS1R1Q7RTX1 841 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 CEP57Q86XR8 500 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 NELFCDQ8IXH7 590 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 ZNF507Q8TCN5 953 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 SCFD1Q8WVM8 642 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 CBWD1Q9BRT8 395 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 GPR62Q9BZJ7 368 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 TUBGCP4Q9UGJ1 667 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 HOOK1Q9UJC3 728 aaKnown RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 UBQLN1Q9UMX0 589 aaKnown RBP12.76□□□□□ -0.37
MRPL55-234ENST00000497758 NUB1Q9Y5A7 615 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 IRAK3Q9Y616 596 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 CITO14578 2027 aa12.76□□□□□ -0.37
MRPL55-234ENST00000497758 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 KLRC4O43908 158 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 EXTL3O43909 919 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 CLASP2O75122 1294 aaKnown RBP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 TBX10O75333 385 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 IL18RAPO95256 599 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 ADH1AP07327 375 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 PRR29P0C7W0 189 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 KLRC2P26717 231 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 KCNQ1P51787 676 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 POU5F1Q01860 360 aaKnown RBP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 DSG1Q02413 1049 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 CREMQ03060 361 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 DPYDQ12882 1025 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 CLUL1Q15846 466 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 ATG2AQ2TAZ0 1938 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 PUS10Q3MIT2 529 aaKnown RBP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 LEXMQ3ZCV2 418 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 FAM171A1Q5VUB5 890 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 JADE1Q6IE81 842 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 RNF168Q8IYW5 571 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 FMR1NBQ8N0W7 255 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-234ENST00000497758 BEST2Q8NFU1 509 aa12.75□□□□□ -0.37
MRPL55-234ENST00000497758 RIN2Q8WYP3 895 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms