RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 BRDTQ58F21 947 aaPredicted RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 C11orf63Q6NUN7 778 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 USP37Q86T82 979 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 REPS2Q8NFH8 660 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 EPS8L3Q8TE67 593 aaKnown RBP12.34□□□□□ -0.43
CDCA7-208ENST00000496441 MFSD14AQ96MC6 490 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 HERPUD2Q9BSE4 406 aa12.34□□□□□ -0.43
CDCA7-208ENST00000496441 BRCA2P51587 3418 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 PI4K2BG5E9Z4 385 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 GZMAP12544 262 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 GLRA2P23416 452 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 R3HDM1Q15032 1099 aaKnown RBP12.33□□□□□ -0.44
CDCA7-208ENST00000496441 PTGISQ16647 500 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 DENND2CQ68D51 928 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 CATSPERGQ6ZRH7 1159 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 RNF25Q96BH1 459 aaPredicted RBP12.33□□□□□ -0.44
CDCA7-208ENST00000496441 ZDHHC18Q9NUE0 388 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 MTUS1Q9ULD2 1270 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 THAP12O43422 761 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 SUPT20HL2P0C7V6 817 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 IFI35P80217 286 aaPredicted RBP12.33□□□□□ -0.44
CDCA7-208ENST00000496441 IFT88Q13099 833 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 MTMR3Q13615 1198 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 SUPT20HL1Q3ZLR7 823 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 ATP13A4Q4VNC1 1196 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 XKR3Q5GH77 459 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 HP1BP3Q5SSJ5 553 aaPredicted RBP12.33□□□□□ -0.44
CDCA7-208ENST00000496441 ZDHHC24Q6UX98 284 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 RUFY4Q6ZNE9 571 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 MMS22LQ6ZRQ5 1243 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 MOB2Q70IA6 237 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 AZI2Q9H6S1 392 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 APOBEC3GQ9HC16 384 aaKnown RBP12.33□□□□□ -0.44
CDCA7-208ENST00000496441 MLXIPLQ9NP71 852 aa12.33□□□□□ -0.44
CDCA7-208ENST00000496441 MAP3K20Q9NYL2 800 aaKnown RBP12.33□□□□□ -0.44
CDCA7-208ENST00000496441 VGLL3A8MV65 326 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 PTGIRP43119 386 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 IFNAR2P48551 515 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 HIRAP54198 1017 aaPredicted RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 TGFB2P61812 414 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 ORC1Q13415 861 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 CLEC16AQ2KHT3 1053 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 TEX2Q8IWB9 1127 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 CD302Q8IX05 232 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 TAB3Q8N5C8 712 aaPredicted RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 NLGN2Q8NFZ4 835 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 NTPCRQ9BSD7 190 aaKnown RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 DDX23Q9BUQ8 820 aaKnown RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 TIPINQ9BVW5 301 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 EPN3Q9H201 632 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 GRHL1Q9NZI5 618 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 TTC7AQ9ULT0 858 aaPredicted RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 OATP04181 439 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 GNA15P30679 374 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 CHRNA3P32297 505 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 PSMC4P43686 418 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 KRT17Q04695 432 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 MCOLN2Q8IZK6 566 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 MGARPQ8TDB4 240 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 HAUS1Q96CS2 278 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 ARHGAP28Q9P2N2 729 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 R3HDM2Q9Y2K5 976 aaKnown RBP12.32□□□□□ -0.44
CDCA7-208ENST00000496441 COQ4Q9Y3A0 265 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 PCDHA3Q9Y5H8 950 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 MROH7Q68CQ1 1323 aa12.32□□□□□ -0.44
CDCA7-208ENST00000496441 SPATA31C2B4DYI2 1134 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 EXTL3O43909 919 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 VNN1O95497 513 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 CST3P01034 146 aaPredicted RBP12.31□□□□□ -0.44
CDCA7-208ENST00000496441 CYP1A2P05177 515 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 CORO7P57737 925 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 PPP2R2AP63151 447 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 GHRHRQ02643 423 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 DHX34Q14147 1143 aaKnown RBP12.31□□□□□ -0.44
CDCA7-208ENST00000496441 TMEM63BQ5T3F8 832 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 CRELD2Q6UXH1 353 aaPredicted RBP12.31□□□□□ -0.44
CDCA7-208ENST00000496441 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 TAX1BP1Q86VP1 789 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 THNSL1Q8IYQ7 743 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 SAMD3Q8N6K7 520 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 CD101Q93033 1021 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 HOXC10Q9NYD6 342 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 ADAM22Q9P0K1 906 aa12.31□□□□□ -0.44
CDCA7-208ENST00000496441 BTBD7Q9P203 1132 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms