RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CTAGE9A4FU28 777 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 STAG3L1P0CL83 205 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 FGFR4P22455 802 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 CCND3P30281 292 aaPredicted RBP17.65■□□□□ 0.42
HLA-A-208ENST00000496081 USP8P40818 1118 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 SCARA3Q6AZY7 606 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 CXCL17Q6UXB2 119 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 GLYCTKQ8IVS8 523 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 MTG1Q9BT17 334 aaPredicted RBP17.65■□□□□ 0.42
HLA-A-208ENST00000496081 SPC25Q9HBM1 224 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 SALL4Q9UJQ4 1053 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 TSKSQ9UJT2 592 aa17.65■□□□□ 0.42
HLA-A-208ENST00000496081 B4GALT4O60513 344 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 PHACTR2O75167 634 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 CLTAP09496 248 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 CXCL8P10145 99 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 PRKAR2AP13861 404 aaKnown RBP17.64■□□□□ 0.41
HLA-A-208ENST00000496081 DUOXA2Q1HG44 320 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 SPOPLQ6IQ16 392 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 ENOSF1Q7L5Y1 443 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 TRAPPC11Q7Z392 1133 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 EFCAB13Q8IY85 973 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 DHX38Q92620 1227 aaKnown RBP17.64■□□□□ 0.41
HLA-A-208ENST00000496081 FAM81BQ96LP2 452 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 OSMRQ99650 979 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 NAPGQ99747 312 aaPredicted RBP17.64■□□□□ 0.41
HLA-A-208ENST00000496081 MTMR12Q9C0I1 747 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 RPF1Q9H9Y2 349 aaKnown RBP17.64■□□□□ 0.41
HLA-A-208ENST00000496081 SCN10AQ9Y5Y9 1956 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 CENPFP49454 3210 aa17.64■□□□□ 0.41
HLA-A-208ENST00000496081 MEFVO15553 781 aaPredicted RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 CYP26A1O43174 497 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 SGPL1O95470 568 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 CST3P01034 146 aaPredicted RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 GNAT1P11488 350 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 DARSP14868 501 aaKnown RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 HOXD10P28358 340 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 NCOA4Q13772 614 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 U2AF1L4Q8WU68 220 aaKnown RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 SLC20A1Q8WUM9 679 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 ARID3AQ99856 593 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 AGPAT1Q99943 283 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 APOBEC3GQ9HC16 384 aaKnown RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 XPNPEP3Q9NQH7 507 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 CAPN6Q9Y6Q1 641 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 IL18RAPO95256 599 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 MOCS3O95396 460 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 TNFAIP3P21580 790 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 HOXA11P31270 313 aaPredicted RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 TFAMQ00059 246 aaKnown RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 POU5F1Q01860 360 aaKnown RBP17.63■□□□□ 0.41
HLA-A-208ENST00000496081 DNAAF5Q86Y56 855 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 BEGAINQ9BUH8 593 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 MRFAP1Q9Y605 127 aa17.63■□□□□ 0.41
HLA-A-208ENST00000496081 KYAT1Q16773 422 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 CATSPER4Q7RTX7 472 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 SLC47A2Q86VL8 602 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 RNF10Q8N5U6 811 aaKnown RBP17.62■□□□□ 0.41
HLA-A-208ENST00000496081 EPS8L1Q8TE68 723 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 ACP6Q9NPH0 428 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 WBP1LQ9NX94 342 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 NOCTQ9UK39 431 aaKnown RBP17.62■□□□□ 0.41
HLA-A-208ENST00000496081 NUB1Q9Y5A7 615 aa17.62■□□□□ 0.41
HLA-A-208ENST00000496081 LACTBL1A8MY62 500 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 CTIFO43310 598 aaKnown RBP17.61■□□□□ 0.41
HLA-A-208ENST00000496081 TACC1O75410 805 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 SLU7O95391 586 aaKnown RBP17.61■□□□□ 0.41
HLA-A-208ENST00000496081 TMEM191BP0C7N4 346 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 EIF4BP23588 611 aaKnown RBP17.61■□□□□ 0.41
HLA-A-208ENST00000496081 NOP14P78316 857 aaKnown RBP17.61■□□□□ 0.41
HLA-A-208ENST00000496081 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.414e-31■■□□□ 13.8
HLA-A-208ENST00000496081 NOP9Q86U38 636 aaKnown RBP17.61■□□□□ 0.41
HLA-A-208ENST00000496081 PALB2Q86YC2 1186 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 NME8Q8N427 588 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 TRIM58Q8NG06 486 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 TMEM40Q8WWA1 233 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 ADPGKQ9BRR6 497 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 GTF2IRD1Q9UHL9 959 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 ATP8B3O60423 1300 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 MYH10P35580 1976 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 BTNL10A8MVZ5 291 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 ENC1O14682 589 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 BUB1O43683 1085 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 ASS1P00966 412 aaKnown RBP17.61■□□□□ 0.41
HLA-A-208ENST00000496081 HMGCRP04035 888 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 H2AFZP0C0S5 128 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 MYL6P60660 151 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 CUL2Q13617 745 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 SNX17Q15036 470 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 SLC10A6Q3KNW5 377 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 MAP3K21Q5TCX8 1036 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 H2AFVQ71UI9 128 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 RPUSD2Q8IZ73 545 aaKnown RBP17.61■□□□□ 0.41
HLA-A-208ENST00000496081 KLHDC9Q8NEP7 349 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 ANKRD36BP1Q96IX9 119 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 INTUQ9ULD6 942 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 UMODL1Q5DID0 1318 aa17.61■□□□□ 0.41
HLA-A-208ENST00000496081 TNNC2P02585 160 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms