RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 HOXA11P31270 313 aaPredicted RBP16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 ABCG1P45844 678 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 MFAP1P55081 439 aaKnown RBP16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 HSP90AA2PQ14568 343 aaPredicted RBP16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 PDZD4Q76G19 769 aaPredicted RBP16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 RTL10Q7L3V2 364 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 PLA2G4DQ86XP0 818 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 PLEKHM2Q8IWE5 1019 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 PNPLA1Q8N8W4 532 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 PIP4K2CQ8TBX8 421 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 ADAMTS14Q8WXS8 1223 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 PAAF1Q9BRP4 392 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 TRPV4Q9HBA0 871 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 GTSE1Q9NYZ3 720 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 SUCLA2Q9P2R7 463 aaPredicted RBP16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 SAMM50Q9Y512 469 aa16.28■□□□□ 0.2
CHMP2B-205ENST00000494980 FLNCQ14315 2725 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 FAM86B1E9PN63 330 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 ZNF197O14709 1029 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 ATG13O75143 517 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 MICAL2O94851 1124 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 FAM86B2P0C5J1 330 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 DNM2P50570 870 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 UGCGQ16739 394 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 NIPA1Q7RTP0 329 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 LSM14AQ8ND56 463 aaKnown RBP16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 CNNM3Q8NE01 707 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 NUSAP1Q9BXS6 441 aaKnown RBP16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 EIF2AQ9BY44 585 aaKnown RBP16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 ANO3Q9BYT9 981 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 CHMP4BQ9H444 224 aaKnown RBP16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 IFT122Q9HBG6 1241 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 SNTG2Q9NY99 539 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 DKK4Q9UBT3 224 aa16.27■□□□□ 0.2
CHMP2B-205ENST00000494980 NBPF19A0A087WUL8 3843 aa16.27■□□□□ 0.19
CHMP2B-205ENST00000494980 hCG_1642624A0A1W2PR95 340 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 IFIT3O14879 490 aaKnown RBP16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 DHPSP49366 369 aaPredicted RBP16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 KCNC4Q03721 635 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 FCHO2Q0JRZ9 810 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 MTERF2Q49AM1 385 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 CATIPQ7Z7H3 387 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 SCUBE3Q8IX30 993 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 HDDC3Q8N4P3 179 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 ZFYVE19Q96K21 471 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 ZNF577Q9BSK1 485 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 MBD1Q9UIS9 605 aaPredicted RBP16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 CDY1Q9Y6F8 540 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 MYO16Q9Y6X6 1858 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 KIAA1549LQ6ZVL6 1849 aa16.26■□□□□ 0.19
CHMP2B-205ENST00000494980 SALL3Q9BXA9 1300 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 ARHGEF37A1IGU5 675 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 KIF4AO95239 1232 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 PLEKHA8P1O95397 391 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 FTH1P19P0C7X4 201 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 GJA1P17302 382 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 PDXDC1Q6P996 788 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 GSTCDQ8NEC7 633 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 DCBLD2Q96PD2 775 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 SH2D3AQ9BRG2 576 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 SLITRK6Q9H5Y7 841 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 MINDY3Q9H8M7 445 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 TBC1D22BQ9NU19 505 aa16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 SEPT9Q9UHD8 586 aaPredicted RBP16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 NUP210Q8TEM1 1887 aaPredicted RBP16.25■□□□□ 0.19
CHMP2B-205ENST00000494980 MUC22E2RYF6 1773 aaPredicted RBP16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 IGLV3-22A0A075B6J6 115 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 IGKV6-21A0A0C4DH24 114 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 ERICH2A1L162 156 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 TMEM150BA6NC51 233 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 CAPN9O14815 690 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 RNF40O75150 1001 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 MOSPD3O75425 235 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 APBB3O95704 486 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 BCKDHBP21953 392 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 SREBF1P36956 1147 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 CFHR1Q03591 330 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 SPIRE1Q08AE8 756 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 GRIK3Q13003 919 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 CYP4A22Q5TCH4 519 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 HEATR3Q7Z4Q2 680 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 C11orf74Q86VG3 221 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 CMTR1Q8N1G2 835 aaKnown RBP16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 E2F7Q96AV8 911 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 TMEM209Q96SK2 561 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 TSC2P49815 1807 aa16.24■□□□□ 0.19
CHMP2B-205ENST00000494980 PTPRDP23468 1912 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 CASTOR2A6NHX0 329 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 WDR64B1ANS9 1081 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 PRRG1O14668 218 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 CYP4F3Q08477 520 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 FSTL4Q6MZW2 842 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 HS6ST3Q8IZP7 471 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 SRBD1Q8N5C6 995 aaKnown RBP16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 GTPBP2Q9BX10 602 aaKnown RBP16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 FSCN3Q9NQT6 498 aa16.23■□□□□ 0.19
CHMP2B-205ENST00000494980 MTRRQ9UBK8 725 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms