RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CLCN4P51793 760 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 CLCNKBP51801 687 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 KRT85P78386 507 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 PPP2R3AQ06190 1150 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 CBX2Q14781 532 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-211ENST00000494800 UPP1Q16831 310 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 ZC2HC1CQ53FD0 456 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-211ENST00000494800 FAM171A1Q5VUB5 890 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 SYCE2Q6PIF2 218 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 SHC4Q6S5L8 630 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 STXBP4Q6ZWJ1 553 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 CEP57Q86XR8 500 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 DNAJC19Q96DA6 116 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 FBXL18Q96ME1 805 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 RIPOR3Q96MK2 946 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 FIZ1Q96SL8 496 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 APOL5Q9BWW9 433 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 PHF7Q9BWX1 381 aaPredicted RBP19.24■□□□□ 0.67
HDAC4-211ENST00000494800 S1PR5Q9H228 398 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 ADAM7Q9H2U9 754 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 SFXN1Q9H9B4 322 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 OLFML3Q9NRN5 406 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 PANK4Q9NVE7 773 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 FNIP2Q9P278 1114 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 RCOR1Q9UKL0 485 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 PCDHA7Q9UN72 937 aa19.24■□□□□ 0.67
HDAC4-211ENST00000494800 TEX28O15482 410 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 XPOTO43592 962 aaKnown RBP19.23■□□□□ 0.67
HDAC4-211ENST00000494800 GCNT3O95395 438 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 GLUD1P00367 558 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 C1RP00736 705 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 MTHFRP42898 656 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 SLC10A6Q3KNW5 377 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 SEZ6Q53EL9 994 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 AXDND1Q5T1B0 1012 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-211ENST00000494800 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.23■□□□□ 0.67
HDAC4-211ENST00000494800 SUSD6Q92537 303 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 B3GALT6Q96L58 329 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 ACCSQ96QU6 501 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 TSPAN18Q96SJ8 248 aa19.23■□□□□ 0.67
HDAC4-211ENST00000494800 RPF1Q9H9Y2 349 aaKnown RBP19.23■□□□□ 0.67
HDAC4-211ENST00000494800 A0A0B4J269 797 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 FRMD3A2A2Y4 597 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 C19orf67A6NJJ6 358 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 PODXLO00592 558 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 POLR2DO15514 142 aaKnown RBP19.22■□□□□ 0.67
HDAC4-211ENST00000494800 CXCL8P10145 99 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 POSTNQ15063 836 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 E2F4Q16254 413 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 ATAT1Q5SQI0 421 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 RARS2Q5T160 578 aaKnown RBP19.22■□□□□ 0.67
HDAC4-211ENST00000494800 ADALQ6DHV7 355 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 CD302Q8IX05 232 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 SYCP3Q8IZU3 236 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 SPATA32Q96LK8 384 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 ZMAT2Q96NC0 199 aaKnown RBP19.22■□□□□ 0.67
HDAC4-211ENST00000494800 GOLGA2P5Q9HBQ8 144 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 KBTBD4Q9NVX7 518 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 TBC1D7Q9P0N9 293 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 NUB1Q9Y5A7 615 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 TTC28Q96AY4 2481 aa19.22■□□□□ 0.67
HDAC4-211ENST00000494800 ALADP13716 330 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 PSMD5Q16401 504 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 RTP2Q5QGT7 225 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
HDAC4-211ENST00000494800 RESP18Q5W5W9 173 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 CEP57L1Q8IYX8 460 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 HDAC7Q8WUI4 952 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 PIK3R5Q8WYR1 880 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 POMGNT1Q8WZA1 660 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 KIF12Q96FN5 646 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 C1QTNF1Q9BXJ1 281 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 HAPLN2Q9GZV7 340 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 TMEM206Q9H813 350 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 MAN1C1Q9NR34 630 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 NR2E1Q9Y466 385 aa19.21■□□□□ 0.67
HDAC4-211ENST00000494800 TTC26A0AVF1 554 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 PPP1R37O75864 691 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 ASIC1P78348 528 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 SOX4Q06945 474 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-211ENST00000494800 STAMQ92783 540 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 C18orf25Q96B23 403 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-211ENST00000494800 RPGRIP1Q96KN7 1286 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 TRIM9Q9C026 710 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 SCAND2PQ9GZW5 306 aaPredicted RBP19.2■□□□□ 0.66
HDAC4-211ENST00000494800 PLEKHA4Q9H4M7 779 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 CD320Q9NPF0 282 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 AGO2Q9UKV8 859 aaKnown RBP19.2■□□□□ 0.66
HDAC4-211ENST00000494800 KCNH3Q9ULD8 1083 aa19.2■□□□□ 0.66
HDAC4-211ENST00000494800 UBQLN1Q9UMX0 589 aaKnown RBP19.2■□□□□ 0.66
HDAC4-211ENST00000494800 CYP3A5P20815 502 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 TNFSF9P41273 254 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 POU5F1Q01860 360 aaKnown RBP19.19■□□□□ 0.66
HDAC4-211ENST00000494800 ENOX2Q16206 610 aaKnown RBP19.19■□□□□ 0.66
HDAC4-211ENST00000494800 SLC39A4Q6P5W5 647 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 PRSS55Q6UWB4 352 aaPredicted RBP19.19■□□□□ 0.66
HDAC4-211ENST00000494800 TMC5Q6UXY8 1006 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 ANKS3Q6ZW76 656 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 PALB2Q86YC2 1186 aa19.19■□□□□ 0.66
HDAC4-211ENST00000494800 GLYCTKQ8IVS8 523 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms