RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	SAAL1	Q96ER3	474 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	KIF12	Q96FN5	646 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	DDX27	Q96GQ7	796 aa	Known RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	TCF25	Q9BQ70	676 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	CBWD1	Q9BRT8	395 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	FAM213A	Q9BRX8	229 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	NSUN3	Q9H649	340 aa	Known RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	ASB7	Q9H672	318 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	NGRN	Q9NPE2	291 aa	Known RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	ENTPD7	Q9NQZ7	604 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	RBAK	Q9NYW8	714 aa	Predicted RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	HSPBP1	Q9NZL4	362 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	UBQLN1	Q9UMX0	589 aa	Known RBP	10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	DERA	Q9Y315	318 aa		10.86	□□□□□ -0.67
MACF1-222	ENST00000494012	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	LACTBL1	A8MY62	500 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	TMEM189-UBE2V1	I3L0A0	370 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	PDXK	O00764	312 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	MEFV	O15553	781 aa	Predicted RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	TGFB1I1	O43294	461 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	CALU	O43852	315 aa	Predicted RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	TADA2A	O75478	443 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	CYP3A5	P20815	502 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	DNAJB1	P25685	340 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	RPL9	P32969	192 aa	Known RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	PPP1R2	P41236	205 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	ELAVL2	Q12926	359 aa	Known RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	STIM1	Q13586	685 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	SMC1A	Q14683	1233 aa	Known RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	BRSK2	Q8IWQ3	736 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	XXYLT1	Q8NBI6	393 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	MICAL1	Q8TDZ2	1067 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	NOC3L	Q8WTT2	800 aa	Known RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	FAM212A	Q96EL1	285 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	ZMAT2	Q96NC0	199 aa	Known RBP	10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	CXCL16	Q9H2A7	254 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	PCIF1	Q9H4Z3	704 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	MARCH5	Q9NX47	278 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	ADAM28	Q9UKQ2	775 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	SSX2IP	Q9Y2D8	614 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	C2CD2	Q9Y426	696 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	PCDHA5	Q9Y5H7	936 aa		10.85	□□□□□ -0.67
MACF1-222	ENST00000494012	ZNF233	A6NK53	670 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	TRAPPC3	O43617	180 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	NCK2	O43639	380 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	B3GAT3	O94766	335 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	CSPG5	O95196	566 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	KIF4A	O95239	1232 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	SOD2	P04179	222 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	UROD	P06132	367 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	CYP2J2	P51589	502 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	CLCNKB	P51801	687 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	CAMK1	Q14012	370 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	TMEM132D	Q14C87	1099 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	SURF1	Q15526	300 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	SNRNP35	Q16560	246 aa	Known RBP	10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	UPP1	Q16831	310 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	COBLL1	Q53SF7	1204 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	JADE1	Q6IE81	842 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	DCLRE1A	Q6PJP8	1040 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	TMC7	Q7Z402	723 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	VPS52	Q8N1B4	723 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	BEST2	Q8NFU1	509 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	TMEM174	Q8WUU8	243 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	PAAF1	Q9BRP4	392 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	ZBP1	Q9H171	429 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	KCTD10	Q9H3F6	313 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	LMBRD1	Q9NUN5	540 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	TRAF3IP3	Q9Y228	551 aa		10.84	□□□□□ -0.67
MACF1-222	ENST00000494012	GOLGA8IP	A6NC78	632 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	GOLGA8J	A6NMD2	632 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	PODXL	O00592	558 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	PSMA7	O14818	248 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	FSCN2	O14926	492 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	EXOC3	O60645	756 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	NR3C1	P04150	777 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	NFIC	P08651	508 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	CTSA	P10619	480 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	RPL13	P26373	211 aa	Known RBP	10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	LRPAP1	P30533	357 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	CA8	P35219	290 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	IRS1	P35568	1242 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	GLUD2	P49448	558 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	ERVFC1	P60507	584 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	CREM	Q03060	361 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	SOX4	Q06945	474 aa	Predicted RBP	10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	SPAG1	Q07617	926 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	MYBPC2	Q14324	1141 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	CCDC85B	Q15834	202 aa	Predicted RBP	10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	ZBTB6	Q15916	424 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	USP41	Q3LFD5	358 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	SPATA1	Q5VX52	437 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	PLPP4	Q5VZY2	271 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	KIAA1841	Q6NSI8	718 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	FUT10	Q6P4F1	479 aa		10.83	□□□□□ -0.68
MACF1-222	ENST00000494012	SLC9A9	Q8IVB4	645 aa		10.83	□□□□□ -0.68

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