RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 TOPORSQ9NS56 1045 aaPredicted RBP5.95□□□□□ -1.46
SMC4-223ENST00000493695 SEMA4GQ9NTN9 838 aa5.95□□□□□ -1.46
SMC4-223ENST00000493695 LRRC3CA6NJW4 275 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 CDC45O75419 566 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 CACNA2D1P54289 1103 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 SRSF4Q08170 494 aaKnown RBP5.94□□□□□ -1.46
SMC4-223ENST00000493695 BHLHA9Q7RTU4 235 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 FAM43AQ8N2R8 423 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 SMG7Q92540 1137 aaKnown RBP5.94□□□□□ -1.46
SMC4-223ENST00000493695 MFSD3Q96ES6 412 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 RAX2Q96IS3 184 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 BCO1Q9HAY6 547 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 SLC17A6Q9P2U8 582 aa5.94□□□□□ -1.46
SMC4-223ENST00000493695 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.93□□□□□ -1.46
SMC4-223ENST00000493695 IL2RBP14784 551 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 ALOX15P16050 662 aaPredicted RBP5.93□□□□□ -1.46
SMC4-223ENST00000493695 SLC6A2P23975 617 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 UBXN2BQ14CS0 331 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 FSCN1Q16658 493 aaKnown RBP5.93□□□□□ -1.46
SMC4-223ENST00000493695 UBE3BQ7Z3V4 1068 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 THNSL2Q86YJ6 484 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 COLGALT2Q8IYK4 626 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 TGFBRAP1Q8WUH2 860 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 BOD1Q96IK1 185 aa5.93□□□□□ -1.46
SMC4-223ENST00000493695 QRSL1Q9H0R6 528 aaKnown RBP5.93□□□□□ -1.46
SMC4-223ENST00000493695 PEX1O43933 1283 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 RBMXL2O75526 392 aaKnown RBP5.92□□□□□ -1.46
SMC4-223ENST00000493695 ENPP1P22413 925 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 SP140Q13342 867 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 NOMO1Q15155 1222 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 Q6ZVL8 140 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 AUTS2Q8WXX7 1259 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 ACAP3Q96P50 834 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 PIF1Q9H611 641 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 LANCL2Q9NS86 450 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 KCNE5Q9UJ90 142 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 PLAAQ9Y263 795 aa5.92□□□□□ -1.46
SMC4-223ENST00000493695 RUVBL1Q9Y265 456 aaKnown RBP5.92□□□□□ -1.46
SMC4-223ENST00000493695 TRGV11A0A075B6L2 103 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 DNAJC9-AS1A6NH13 148 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 ORC4O43929 436 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 PRSS23O95084 383 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 MYCLP1P12525 358 aaPredicted RBP5.91□□□□□ -1.46
SMC4-223ENST00000493695 ALDH1A3P47895 512 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 SRRM1Q8IYB3 904 aaKnown RBP5.91□□□□□ -1.46
SMC4-223ENST00000493695 NACC2Q96BF6 587 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 ACE2Q9BYF1 805 aaPredicted RBP5.91□□□□□ -1.46
SMC4-223ENST00000493695 CPNE5Q9HCH3 593 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 TMEM140Q9NV12 185 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 FOXJ2Q9P0K8 574 aa5.91□□□□□ -1.46
SMC4-223ENST00000493695 AJAP1Q9UKB5 411 aaPredicted RBP5.91□□□□□ -1.46
SMC4-223ENST00000493695 GOLGA8AA7E2F4 631 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 WNT10BO00744 389 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 CKBP12277 381 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 GCSHP23434 173 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 EXOSC10Q01780 885 aaKnown RBP5.9□□□□□ -1.46
SMC4-223ENST00000493695 CYP2A13Q16696 494 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 MUM1L1Q5H9M0 696 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.9□□□□□ -1.46
SMC4-223ENST00000493695 FATE1Q969F0 183 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 MARS2Q96GW9 593 aaKnown RBP5.9□□□□□ -1.46
SMC4-223ENST00000493695 MYOCQ99972 504 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 ADI1Q9BV57 179 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 UNKLQ9H9P5 680 aaKnown RBP5.9□□□□□ -1.46
SMC4-223ENST00000493695 DMRT3Q9NQL9 472 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 TMEM74BQ9NUR3 256 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 FBXO34Q9NWN3 711 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 KCTD5Q9NXV2 234 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 SIK3Q9Y2K2 1263 aa5.9□□□□□ -1.46
SMC4-223ENST00000493695 CCDC78A2IDD5 438 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 PDE8AO60658 829 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 ULK1O75385 1050 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 SREBF1P36956 1147 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 ID4P47928 161 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 ZNF81P51508 661 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 VAV2P52735 878 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 SESN3P58005 492 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 NHLH1Q02575 133 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 GEN1Q17RS7 908 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 DALRD3Q5D0E6 543 aaKnown RBP5.89□□□□□ -1.47
SMC4-223ENST00000493695 CLRN3Q8NCR9 226 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 CCHCR1Q8TD31 782 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 SSH3Q8TE77 659 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 TTC1Q99614 292 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 IFT122Q9HBG6 1241 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 ALG13Q9NP73 1137 aaKnown RBP5.89□□□□□ -1.47
SMC4-223ENST00000493695 RBM12Q9NTZ6 932 aaKnown RBP5.89□□□□□ -1.47
SMC4-223ENST00000493695 ACTL7AQ9Y615 435 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 ATRNL1Q5VV63 1379 aa5.89□□□□□ -1.47
SMC4-223ENST00000493695 GSG1L2A8MUP6 293 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 ALAS1P13196 640 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 SCAND1P57086 179 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 FOXF2Q12947 444 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 SF3B3Q15393 1217 aaKnown RBP5.88□□□□□ -1.47
SMC4-223ENST00000493695 ADRM1Q16186 407 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 GJC2Q5T442 439 aaPredicted RBP5.88□□□□□ -1.47
SMC4-223ENST00000493695 PDLIM2Q96JY6 352 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 GREM2Q9H772 168 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 IFT22Q9H7X7 185 aa5.88□□□□□ -1.47
SMC4-223ENST00000493695 NEMP1O14524 444 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms