RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ANKRD54Q6NXT1 300 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 FUT10Q6P4F1 479 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 CNNM4Q6P4Q7 775 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 PDXDC1Q6P996 788 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 ELMSAN1Q6PJG2 1045 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 CEP57Q86XR8 500 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 CD302Q8IX05 232 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 GPR65Q8IYL9 337 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 RNF168Q8IYW5 571 aaPredicted RBP7.61□□□□□ -1.19
TOP3A-207ENST00000493648 SYCP3Q8IZU3 236 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 AUTS2Q8WXX7 1259 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 MSLNLQ96KJ4 702 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 SNX27Q96L92 541 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 KLHL5Q96PQ7 755 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 C7orf25Q9BPX7 421 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 STRA6Q9BX79 667 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 GPR62Q9BZJ7 368 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 TRIM9Q9C026 710 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 HAPLN2Q9GZV7 340 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 CXCL16Q9H2A7 254 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 TMEM206Q9H813 350 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 RPF1Q9H9Y2 349 aaKnown RBP7.61□□□□□ -1.19
TOP3A-207ENST00000493648 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.61□□□□□ -1.19
TOP3A-207ENST00000493648 CHST7Q9NS84 486 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 CNTN3Q9P232 1028 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 PRKAG3Q9UGI9 489 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 DPP7Q9UHL4 492 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 USP25Q9UHP3 1055 aa7.61□□□□□ -1.19
TOP3A-207ENST00000493648 BARX2Q9UMQ3 279 aaPredicted RBP7.61□□□□□ -1.19
TOP3A-207ENST00000493648 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.61□□□□□ -1.19
TOP3A-207ENST00000493648 TCHHQ07283 1943 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 A0A1B0GVL5 298 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 TTC26A0AVF1 554 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 FRMD3A2A2Y4 597 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 SPDYE4A6NLX3 237 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 LACTBL1A8MY62 500 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 ANKRD63C9JTQ0 380 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 F8W810 466 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 TMEM189-UBE2V1I3L0A0 370 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 PPP1R37O75864 691 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 KIF4AO95239 1232 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 EFEMP2O95967 443 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 LDHAP00338 332 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 CNPP09543 421 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 SLFN14P0C7P3 912 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 IL9P15248 144 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 CYP3A5P20815 502 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 SSTR3P32745 418 aaPredicted RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 TNFSF9P41273 254 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 AFMP43652 599 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 CLCNKBP51801 687 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 RBM10P98175 930 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 POU5F1Q01860 360 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 ITIH3Q06033 890 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 SMAD2Q15796 467 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 UPP1Q16831 310 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 FAM171A1Q5VUB5 890 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 CES5AQ6NT32 575 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 VN1R2Q8NFZ6 395 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 HASPINQ8TF76 798 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 SLC22A17Q8WUG5 538 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 RIN2Q8WYP3 895 aaPredicted RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 POMGNT1Q8WZA1 660 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 FAM212AQ96EL1 285 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 KIF12Q96FN5 646 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 ZMAT2Q96NC0 199 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 POP1Q99575 1024 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 PAAF1Q9BRP4 392 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 TTPALQ9BTX7 342 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 RXFP1Q9HBX9 757 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 DZANK1Q9NVP4 752 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 FNIP2Q9P278 1114 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 CACNG4Q9UBN1 327 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 SERTAD1Q9UHV2 236 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 CPSF3Q9UKF6 684 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 AGO2Q9UKV8 859 aaKnown RBP7.6□□□□□ -1.19
TOP3A-207ENST00000493648 HCFC2Q9Y5Z7 792 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 STYXL1Q9Y6J8 313 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 BRWD1Q9NSI6 2320 aa7.6□□□□□ -1.19
TOP3A-207ENST00000493648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PVALEFA0A1B0GWK0 134 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 A0A1W2PQ27 194 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 A0A1W2PQ64 194 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 A0A1W2PQD8 194 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 GOLGA6L4A6NEF3 574 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 TULP1O00294 542 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PODXLO00592 558 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 TEX28O15482 410 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 PRPF6O94906 941 aaKnown RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 C1RP00736 705 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 ADRB2P07550 413 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 CXCL8P10145 99 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 MYBP10242 640 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 EPCAMP16422 314 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 GARTP22102 1010 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 ACOT2P49753 483 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 CLCN4P51793 760 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 SOX4Q06945 474 aaPredicted RBP7.59□□□□□ -1.19
TOP3A-207ENST00000493648 SPAG1Q07617 926 aa7.59□□□□□ -1.19
TOP3A-207ENST00000493648 KCNA1Q09470 495 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms