RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 DTNBO60941 627 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 SPATA31C1P0DKV0 1188 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 DCAF4L1Q3SXM0 396 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 CCDC113Q9H0I3 377 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 CXCL16Q9H2A7 254 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 EPC1Q9H2F5 836 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 MRPS17Q9Y2R5 130 aaKnown RBP22.77■■□□□ 1.24
CLIP2-208ENST00000491075 BACE2Q9Y5Z0 518 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 CDY1Q9Y6F8 540 aa22.77■■□□□ 1.24
CLIP2-208ENST00000491075 B3GAT3O94766 335 aa22.76■■□□□ 1.23
CLIP2-208ENST00000491075 TARSP26639 723 aaKnown RBP22.76■■□□□ 1.23
CLIP2-208ENST00000491075 NAMPTP43490 491 aa22.76■■□□□ 1.23
CLIP2-208ENST00000491075 ZNF852Q6ZMS4 543 aa22.76■■□□□ 1.23
CLIP2-208ENST00000491075 ANKS3Q6ZW76 656 aa22.76■■□□□ 1.23
CLIP2-208ENST00000491075 NELL1Q92832 810 aa22.76■■□□□ 1.23
CLIP2-208ENST00000491075 UROC1Q96N76 676 aa22.76■■□□□ 1.23
CLIP2-208ENST00000491075 AVENQ9NQS1 362 aaPredicted RBP22.76■■□□□ 1.23
CLIP2-208ENST00000491075 SMG5Q9UPR3 1016 aaKnown RBP22.76■■□□□ 1.23
CLIP2-208ENST00000491075 GDAQ9Y2T3 454 aa22.76■■□□□ 1.23
CLIP2-208ENST00000491075 TRAPPC3O43617 180 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 LILRB5O75023 590 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 RHOP08100 348 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 FDPSP14324 419 aaKnown RBP22.75■■□□□ 1.23
CLIP2-208ENST00000491075 PPP2R5AQ15172 486 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 CATSPER3Q86XQ3 398 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 DEPTORQ8TB45 409 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 BSNDQ8WZ55 320 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 DNASE1L2Q92874 299 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 DDX27Q96GQ7 796 aaKnown RBP22.75■■□□□ 1.23
CLIP2-208ENST00000491075 PPP1R10Q96QC0 940 aaKnown RBP22.75■■□□□ 1.23
CLIP2-208ENST00000491075 NACC1Q96RE7 527 aa22.75■■□□□ 1.23
CLIP2-208ENST00000491075 PRMT8Q9NR22 394 aaPredicted RBP22.75■■□□□ 1.23
CLIP2-208ENST00000491075 WNT7AO00755 349 aa22.74■■□□□ 1.23
CLIP2-208ENST00000491075 TKTP29401 623 aaKnown RBP22.74■■□□□ 1.23
CLIP2-208ENST00000491075 ANKRD1Q15327 319 aa22.74■■□□□ 1.23
CLIP2-208ENST00000491075 SLC5A9Q2M3M2 681 aa22.74■■□□□ 1.23
CLIP2-208ENST00000491075 EEF1DP3Q658K8 133 aa22.74■■□□□ 1.23
CLIP2-208ENST00000491075 ELSPBP1Q96BH3 223 aa22.74■■□□□ 1.23
CLIP2-208ENST00000491075 MCRS1Q96EZ8 462 aa22.74■■□□□ 1.23
CLIP2-208ENST00000491075 FAM126AQ9BYI3 521 aaPredicted RBP22.74■■□□□ 1.23
CLIP2-208ENST00000491075 BTBD18B2RXH4 712 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 MED24O75448 989 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 EDN1P05305 212 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 LIG1P18858 919 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 CLCNKBP51801 687 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 EFNA5P52803 228 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 LMNB2Q03252 620 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 ADCY1Q08828 1119 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 UPP1Q16831 310 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 GLRA4Q5JXX5 417 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 PADI6Q6TGC4 694 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 APBB1IPQ7Z5R6 666 aaPredicted RBP22.73■■□□□ 1.23
CLIP2-208ENST00000491075 DIS3L2Q8IYB7 885 aaKnown RBP22.73■■□□□ 1.23
CLIP2-208ENST00000491075 POLR3CQ9BUI4 534 aaPredicted RBP22.73■■□□□ 1.23
CLIP2-208ENST00000491075 HEBP1Q9NRV9 189 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 USP20Q9Y2K6 914 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 COL4A2P08572 1712 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 CACNA1BQ00975 2339 aa22.73■■□□□ 1.23
CLIP2-208ENST00000491075 ARHGEF37A1IGU5 675 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 ARHGEF35A5YM69 484 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 PRR5-ARHGAP8B1AHC4 643 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 TBC1D4O60343 1298 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 LRG1P02750 347 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 CEBPBP17676 345 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 PTPN2P17706 415 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 CYP11B2P19099 503 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 ARHGAP8P85298 464 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 SLC8B1Q6J4K2 584 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 ZNF461Q8TAF7 563 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 PLA2G2FQ9BZM2 168 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 TMEM60Q9H2L4 133 aa22.72■■□□□ 1.23
CLIP2-208ENST00000491075 CDV3Q9UKY7 258 aaKnown RBP22.72■■□□□ 1.23
CLIP2-208ENST00000491075 TICRRQ7Z2Z1 1910 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 IGFBP6P24592 240 aaPredicted RBP22.71■■□□□ 1.23
CLIP2-208ENST00000491075 ELF1P32519 619 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 ROR1Q01973 937 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 TRIM29Q14134 588 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 ATF7IP2Q5U623 682 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 TANGO2Q6ICL3 276 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 TSSK4Q6SA08 328 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 CD300LGQ6UXG3 332 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 C3orf58Q8NDZ4 430 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 ERMNQ8TAM6 284 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 EPG5Q9HCE0 2579 aa22.71■■□□□ 1.23
CLIP2-208ENST00000491075 CITO14578 2027 aa22.7■■□□□ 1.23
CLIP2-208ENST00000491075 MAN2B1O00754 1011 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 PRRG1O14668 218 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 RPA1P27694 616 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 MTAPQ13126 283 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 FZD5Q13467 585 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 GTF3C6Q969F1 213 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 IFT74Q96LB3 600 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 IER2Q9BTL4 223 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 GOLGA2P5Q9HBQ8 144 aa22.7■■□□□ 1.22
CLIP2-208ENST00000491075 SHISA7A6NL88 538 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 I3L4J1 428 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 ABLIM3O94929 683 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 FCARP24071 287 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 MCM7P33993 719 aa22.69■■□□□ 1.22
CLIP2-208ENST00000491075 BRCC3P46736 316 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms