RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-207ENST00000491052 C18orf25Q96B23 403 aaPredicted RBP13.96□□□□□ -0.17
LIMK1-207ENST00000491052 KIF12Q96FN5 646 aa13.96□□□□□ -0.17
LIMK1-207ENST00000491052 FAM213AQ9BRX8 229 aa13.96□□□□□ -0.17
LIMK1-207ENST00000491052 AGPAT3Q9NRZ7 376 aa13.96□□□□□ -0.17
LIMK1-207ENST00000491052 TSC2P49815 1807 aa13.96□□□□□ -0.17
LIMK1-207ENST00000491052 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 TADA2AO75478 443 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 KIF4AO95239 1232 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 LDHAP00338 332 aaKnown RBP13.95□□□□□ -0.18
LIMK1-207ENST00000491052 CYP2J2P51589 502 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 SOX4Q06945 474 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-207ENST00000491052 BMS1Q14692 1282 aaKnown RBP13.95□□□□□ -0.18
LIMK1-207ENST00000491052 KCNB1Q14721 858 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 KNOP1Q1ED39 458 aaKnown RBP13.95□□□□□ -0.18
LIMK1-207ENST00000491052 PDE12Q6L8Q7 609 aaKnown RBP13.95□□□□□ -0.18
LIMK1-207ENST00000491052 DDX53Q86TM3 631 aaKnown RBP13.95□□□□□ -0.18
LIMK1-207ENST00000491052 GPD1LQ8N335 351 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 ZSWIM2Q8NEG5 633 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 SMARCE1Q969G3 411 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 PPP2R3CQ969Q6 453 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 UROC1Q96N76 676 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 VN1R3Q9BXE9 311 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 RMND1Q9NWS8 449 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 TUBGCP4Q9UGJ1 667 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 ADAM28Q9UKQ2 775 aa13.95□□□□□ -0.18
LIMK1-207ENST00000491052 FSCN2O14926 492 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 KIAA0391O15091 583 aaKnown RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 CLIC2O15247 247 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 TGFB1I1O43294 461 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 XPOTO43592 962 aaKnown RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 EXTL3O43909 919 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 CLCNKBP51801 687 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 TMEM132DQ14C87 1099 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 JADE1Q6IE81 842 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 FUT10Q6P4F1 479 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 CRELD2Q6UXH1 353 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 CLEC17AQ6ZS10 378 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 ADGRD2Q7Z7M1 963 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 RBM23Q86U06 439 aaKnown RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 CD302Q8IX05 232 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 GOLGA5Q8TBA6 731 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 AUTS2Q8WXX7 1259 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 ZBP1Q9H171 429 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 NGRNQ9NPE2 291 aaKnown RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 RBAKQ9NYW8 714 aaPredicted RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 HSPBP1Q9NZL4 362 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 STK39Q9UEW8 545 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 UBQLN1Q9UMX0 589 aaKnown RBP13.94□□□□□ -0.18
LIMK1-207ENST00000491052 MAPK8IP1Q9UQF2 711 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 PCDHA5Q9Y5H7 936 aa13.94□□□□□ -0.18
LIMK1-207ENST00000491052 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.18
LIMK1-207ENST00000491052 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-207ENST00000491052 PODXLO00592 558 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 B3GAT3O94766 335 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 KIF20AO95235 890 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 IL18RAPO95256 599 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 URODP06132 367 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 NFICP08651 508 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 NRIP1P48552 1158 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 SNRPFP62306 86 aaKnown RBP13.93□□□□□ -0.18
LIMK1-207ENST00000491052 KIAA1841Q6NSI8 718 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 EP400NLQ6ZTU2 488 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 BRSK2Q8IWQ3 736 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 SMYD4Q8IYR2 804 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-207ENST00000491052 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
LIMK1-207ENST00000491052 GSDMAQ96QA5 445 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 HERC2P3Q9BVR0 1158 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 IGFLR1Q9H665 355 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 TLE6Q9H808 572 aa13.93□□□□□ -0.18
LIMK1-207ENST00000491052 CGNQ9P2M7 1197 aaKnown RBP13.93□□□□□ -0.18
LIMK1-207ENST00000491052 C2orf16Q68DN1 1984 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 ZNF233A6NK53 670 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 HIDE1A8MVS5 230 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 GOLGA6L22H0YM25 854 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 C2CD2LO14523 706 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 CXCL14O95715 111 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 SOD2P04179 222 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 ADRB2P07550 413 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 CTSAP10619 480 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 RPL9P32969 192 aaKnown RBP13.92□□□□□ -0.18
LIMK1-207ENST00000491052 GLUD2P49448 558 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 GUCY2FP51841 1108 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 POU5F1Q01860 360 aaKnown RBP13.92□□□□□ -0.18
LIMK1-207ENST00000491052 HYAL1Q12794 435 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 UPP1Q16831 310 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 DCLRE1AQ6PJP8 1040 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 CBWD2Q8IUF1 395 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 ELOA2Q8IYF1 753 aaPredicted RBP13.92□□□□□ -0.18
LIMK1-207ENST00000491052 TMEM130Q8N3G9 435 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 XXYLT1Q8NBI6 393 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 BEST2Q8NFU1 509 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 B3GALT6Q96L58 329 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 TSPAN18Q96SJ8 248 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 GPR62Q9BZJ7 368 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 ASB7Q9H672 318 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 PRDM6Q9NQX0 595 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
LIMK1-207ENST00000491052 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms