RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ARID2Q68CP9 1835 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 ASCC3Q8N3C0 2202 aaKnown RBP15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 LNP1A1A4G5 178 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 CSRP1P21291 193 aaKnown RBP15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 AXLP30530 894 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 KPNA1P52294 538 aaPredicted RBP15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 TUSC3Q13454 348 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 PLK5Q496M5 336 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 PKN3Q6P5Z2 889 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 RTL10Q7L3V2 364 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 CDR2LQ86X02 465 aaPredicted RBP15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 MFSD6LQ8IWD5 586 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 DEFB124Q8NES8 71 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 TTC8Q8TAM2 541 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 PSPC1Q8WXF1 523 aaKnown RBP15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 CCDC51Q96ER9 411 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 BBC3Q96PG8 261 aaPredicted RBP15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 TRIM6Q9C030 488 aaPredicted RBP15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 MTRRQ9UBK8 725 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 PARP2Q9UGN5 583 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 MSRB2Q9Y3D2 182 aa15.24■□□□□ 0.03
EXOSC3-207ENST00000490516 BPTFQ12830 3046 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 SPECC1L-ADORA2AF8WAN1 911 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 PSMD10O75832 226 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 LRG1P02750 347 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 IGFBP6P24592 240 aaPredicted RBP15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 MLLT6P55198 1093 aaPredicted RBP15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 CREB5Q02930 508 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 PON2Q15165 354 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 COL28A1Q2UY09 1125 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 PDXDC1Q6P996 788 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 REXO1Q8N1G1 1221 aaKnown RBP15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 RDM1Q8NG50 284 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 SLC7A3Q8WY07 619 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 DUSP15Q9H1R2 295 aaPredicted RBP15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 RBM28Q9NW13 759 aaKnown RBP15.23■□□□□ 0.03
EXOSC3-207ENST00000490516 PCNX2A6NKB5 2137 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 ARHGEF37A1IGU5 675 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 CYSRT1A8MQ03 144 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 HEPACAM2A8MVW5 462 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 MOSPD3O75425 235 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 NPTXRO95502 500 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 CAVIN2O95810 425 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 GJA1P17302 382 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 ARF4P18085 180 aaPredicted RBP15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 CTHP32929 405 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 SPIRE1Q08AE8 756 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 CCINQ13939 588 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 FERMT3Q86UX7 667 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 PROSER1Q86XN7 944 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 HACE1Q8IYU2 909 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 HS6ST3Q8IZP7 471 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 ZSCAN18Q8TBC5 510 aaPredicted RBP15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 RSPRY1Q96DX4 576 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 MSANTD3Q96H12 275 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 ZMYND12Q9H0C1 365 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 DHX33Q9H6R0 707 aaKnown RBP15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 C8orf33Q9H7E9 229 aaPredicted RBP15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 ANKFY1Q9P2R3 1169 aa15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
EXOSC3-207ENST00000490516 CCDC163A0A0D9SF12 145 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 INO80B-WBP1J3KQ70 363 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 CDX4O14627 284 aaPredicted RBP15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 ZNF197O14709 1029 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 MICAL2O94851 1124 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 CAPNS1P04632 268 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 FGFR3P22607 806 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 ELAVL2Q12926 359 aaKnown RBP15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 AMHR2Q16671 573 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 RTN1Q16799 776 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 C1orf228Q6PIY5 440 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 APOA5Q6Q788 366 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 B3GNT9Q6UX72 402 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 PDZD4Q76G19 769 aaPredicted RBP15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 SGMS1Q86VZ5 419 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 GPIHBP1Q8IV16 184 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 SMC5Q8IY18 1101 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 ABCA7Q8IZY2 2146 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 FAM200AQ8TCP9 573 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 C6orf50Q9HD87 102 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 TMEM9BQ9NQ34 198 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 POLR3BQ9NW08 1133 aaPredicted RBP15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 SNTG2Q9NY99 539 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 THADAQ6YHU6 1953 aa15.21■□□□□ 0.03
EXOSC3-207ENST00000490516 TRIP11Q15643 1979 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 ESYT2A0FGR8 921 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 BCLAF3A2AJT9 711 aaKnown RBP15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 PRRG1O14668 218 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 PTGESO14684 152 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 DCLK1O15075 740 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 B4GALT5O43286 388 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 AKAP3O75969 853 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 PTENP60484 403 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 PSMC5P62195 406 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 FGD1P98174 961 aa15.2■□□□□ 0.02
EXOSC3-207ENST00000490516 NUCB1Q02818 461 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms