RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ALCAM	Q13740	583 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	SMAD2	Q15796	467 aa	Known RBP	12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	UPP1	Q16831	310 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	SLC10A6	Q3KNW5	377 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	SEZ6	Q53EL9	994 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	KIAA0319	Q5VV43	1072 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	SLFN12L	Q6IEE8	588 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	ANKRD54	Q6NXT1	300 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	DCLRE1A	Q6PJP8	1040 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	HASPIN	Q8TF76	798 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	STAM	Q92783	540 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	ZMAT2	Q96NC0	199 aa	Known RBP	12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	KLHL5	Q96PQ7	755 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	ACCS	Q96QU6	501 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	GPR62	Q9BZJ7	368 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	TRIM9	Q9C026	710 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	HAPLN2	Q9GZV7	340 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	BRWD1	Q9NSI6	2320 aa		12.09	□□□□□ -0.47
GGA1-222	ENST00000489772	TMEM189-UBE2V1	I3L0A0	370 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	OGT	O15294	1046 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	TRAPPC3	O43617	180 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	PPP1R37	O75864	691 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	ADH1A	P07327	375 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	CXCL8	P10145	99 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	CMA1	P23946	247 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	RPL9	P32969	192 aa	Known RBP	12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	ASIC1	P78348	528 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	NUCB2	P80303	420 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	PPP2R3A	Q06190	1150 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	TPRN	Q4KMQ1	711 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	L1TD1	Q5T7N2	865 aa	Known RBP	12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	FAM171A1	Q5VUB5	890 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	ADAL	Q6DHV7	355 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	CNNM4	Q6P4Q7	775 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	SLC39A4	Q6P5W5	647 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	STXBP4	Q6ZWJ1	553 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	GPR65	Q8IYL9	337 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	CEP57L1	Q8IYX8	460 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	B3GALT6	Q96L58	329 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	C7orf25	Q9BPX7	421 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	TTPAL	Q9BTX7	342 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	STRA6	Q9BX79	667 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	RPF1	Q9H9Y2	349 aa	Known RBP	12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	RXFP1	Q9HBX9	757 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	DZANK1	Q9NVP4	752 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	PRKAG3	Q9UGI9	489 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	STYXL1	Q9Y6J8	313 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	PLXNA4	Q9HCM2	1894 aa		12.08	□□□□□ -0.48
GGA1-222	ENST00000489772	PODXL	O00592	558 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	TEX28	O15482	410 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	MEFV	O15553	781 aa	Predicted RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	FAM189A1	O60320	539 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	MYB	P10242	640 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	EPCAM	P16422	314 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	TNFSF9	P41273	254 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	CLCN4	P51793	760 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	SOX4	Q06945	474 aa	Predicted RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	POSTN	Q15063	836 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	CES5A	Q6NT32	575 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	PDXDC1	Q6P996	788 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	SYCE2	Q6PIF2	218 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	ELMSAN1	Q6PJG2	1045 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	CEP57	Q86XR8	500 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	ADHFE1	Q8IWW8	467 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	CD302	Q8IX05	232 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	SYCP3	Q8IZU3	236 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	GJD3	Q8N144	294 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	SLC22A17	Q8WUG5	538 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	RIN2	Q8WYP3	895 aa	Predicted RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	POMGNT1	Q8WZA1	660 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	C18orf25	Q96B23	403 aa	Predicted RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	KIF12	Q96FN5	646 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	CHAMP1	Q96JM3	812 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	FBXL18	Q96ME1	805 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	TSPAN18	Q96SJ8	248 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	POP1	Q99575	1024 aa	Known RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	S1PR5	Q9H228	398 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	TMEM206	Q9H813	350 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	GOLGA2P5	Q9HBQ8	144 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	DPP7	Q9UHL4	492 aa		12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	CPSF3	Q9UKF6	684 aa	Known RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	AGO2	Q9UKV8	859 aa	Known RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	USP15	Q9Y4E8	981 aa	Predicted RBP	12.07	□□□□□ -0.48
GGA1-222	ENST00000489772	TTC26	A0AVF1	554 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	SPDYE4	A6NLX3	237 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	LACTBL1	A8MY62	500 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	ANKRD63	C9JTQ0	380 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	XPOT	O43592	962 aa	Known RBP	12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	SLFN14	P0C7P3	912 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	PFKFB1	P16118	471 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	SSTR3	P32745	418 aa	Predicted RBP	12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	CASP5	P51878	434 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	ITIH3	Q06033	890 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	KCNA1	Q09470	495 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	ENOX2	Q16206	610 aa	Known RBP	12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	RTP2	Q5QGT7	225 aa		12.06	□□□□□ -0.48
GGA1-222	ENST00000489772	ZBTB41	Q5SVQ8	909 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms