RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 ZC3H11AO75152 810 aaKnown RBP eCLIP13.52□□□□□ -0.25
COL4A5-206ENST00000489230 DDHD2O94830 711 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 CYP3A5P20815 502 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 DSC1Q08554 894 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 NFIL3Q16649 462 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 DCLRE1AQ6PJP8 1040 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 USP37Q86T82 979 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 ZNF280BQ86YH2 543 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 CEP120Q8N960 986 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 KLHL23Q8NBE8 558 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 TMEM169Q96HH4 297 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 SNX27Q96L92 541 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 PPP1R10Q96QC0 940 aaKnown RBP13.52□□□□□ -0.25
COL4A5-206ENST00000489230 TSG101Q99816 390 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 KCTD10Q9H3F6 313 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 PCIF1Q9H4Z3 704 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 HSPBP1Q9NZL4 362 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 MAN1B1Q9UKM7 699 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
COL4A5-206ENST00000489230 BDP1A6H8Y1 2624 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 PRRC2BQ5JSZ5 2229 aaKnown RBP13.51□□□□□ -0.25
COL4A5-206ENST00000489230 PTGESO14684 152 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 EXOC3O60645 756 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 FGF18O76093 207 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 LINC00271P0C7V0 271 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 PRCPP42785 496 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 OR1G1P47890 313 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 AFF1P51825 1210 aaKnown RBP13.51□□□□□ -0.25
COL4A5-206ENST00000489230 MORC3Q14149 939 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
COL4A5-206ENST00000489230 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 TMEM31Q5JXX7 168 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 MLKLQ8NB16 471 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 HLA-CQ95604 372 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 SYAP1Q96A49 352 aaPredicted RBP13.51□□□□□ -0.25
COL4A5-206ENST00000489230 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 IGSF21Q96ID5 467 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 FBXL18Q96ME1 805 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 CBWD1Q9BRT8 395 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 LRFN3Q9BTN0 628 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 EPHX3Q9H6B9 360 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 RBAKQ9NYW8 714 aaPredicted RBP13.51□□□□□ -0.25
COL4A5-206ENST00000489230 UBQLN1Q9UMX0 589 aaKnown RBP13.51□□□□□ -0.25
COL4A5-206ENST00000489230 MAPK8IP1Q9UQF2 711 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 SSX2IPQ9Y2D8 614 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 FRMD4BQ9Y2L6 1034 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 C2CD2Q9Y426 696 aa13.51□□□□□ -0.25
COL4A5-206ENST00000489230 BICDL2A1A5D9 508 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 EPOPA6NHQ4 379 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 TISP43B9A030 160 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 NRP1O14786 923 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 CLIC2O15247 247 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 TADA2AO75478 443 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 ARHGEF15O94989 841 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 CXCL8P10145 99 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 HOXD11P31277 338 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 TNFSF9P41273 254 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 SLC11A1P49279 550 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 ELAVL2Q12926 359 aaKnown RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 ADAM9Q13443 819 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 SNRNP35Q16560 246 aaKnown RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 CT47A1Q5JQC4 288 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 CENPPQ6IPU0 288 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 FOXR2Q6PJQ5 311 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 DDX53Q86TM3 631 aaKnown RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 ADSSL1Q8N142 457 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 SLC39A11Q8N1S5 342 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 BEST2Q8NFU1 509 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 SPPL3Q8TCT6 385 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 GPT2Q8TD30 523 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 NOC3LQ8WTT2 800 aaKnown RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 ERCC4Q92889 916 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 PPP2R3CQ969Q6 453 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 SAAL1Q96ER3 474 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 NGRNQ9NPE2 291 aaKnown RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 DMAC2Q9NW81 257 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 DACH1Q9UI36 760 aa13.5□□□□□ -0.25
COL4A5-206ENST00000489230 R3HCC1Q9Y3T6 440 aaKnown RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
COL4A5-206ENST00000489230 GOLGA8IPA6NC78 632 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 GOLGA8JA6NMD2 632 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 CETN3O15182 167 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 MAPK13O15264 365 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 LPXNO60711 386 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 LETM1O95202 739 aaPredicted RBP13.49□□□□□ -0.25
COL4A5-206ENST00000489230 FGFR1OPO95684 399 aaKnown RBP13.49□□□□□ -0.25
COL4A5-206ENST00000489230 NR3C1P04150 777 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 ITGB1P05556 798 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 CYP2J2P51589 502 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 AP3M2P53677 418 aa13.49□□□□□ -0.25
COL4A5-206ENST00000489230 FKBP3Q00688 224 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms