RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 PTCHD1Q96NR3 888 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 NUP88Q99567 741 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 SENP6Q9GZR1 1112 aaPredicted RBP9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 TNFRSF10DQ9UBN6 386 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 GJD2Q9UKL4 321 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 RABGAP1Q9Y3P9 1069 aa9.26□□□□□ -0.93
TRAPPC12-221ENST00000489032 DNAJC25-GNG10A0A024R161 153 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 A0A1W2PQ27 194 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 A0A1W2PQ64 194 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 A0A1W2PQC6 194 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 A0A1W2PQD8 194 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 MEFVO15553 781 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 PLA2G6O60733 806 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 SCG5P05408 212 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 THBDP07204 575 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 PARP1P09874 1014 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CALM1P0DP23 149 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CALM2P0DP24 149 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CALM3P0DP25 149 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 PDHBP11177 359 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CASTP20810 708 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CYP2B6P20813 491 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 COPB2P35606 906 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 LIFRP42702 1097 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 ANTXR2P58335 489 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 PLS1Q14651 629 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 SLC14A2Q15849 920 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 RALGPS1Q5JS13 557 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 USP53Q70EK8 1073 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CTCFLQ8NI51 663 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 PPM1EQ8WY54 764 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 TM6SF1Q9BZW5 370 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 ZFP64Q9NPA5 681 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 FBXO28Q9NVF7 368 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 TMEM260Q9NX78 707 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CLEC1BQ9P126 229 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 MORF4L1Q9UBU8 362 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 CYP46A1Q9Y6A2 500 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 NCOR1O75376 2440 aa9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 FRMPD2Q68DX3 1309 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-221ENST00000489032 SH2B2O14492 632 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 DHX16O60231 1041 aaKnown RBP9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 DLX3O60479 287 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 SLC25A27O95847 323 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 PLS3P13797 630 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 RAC2P15153 192 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 RPS6KB1P23443 525 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 MAPK4P31152 587 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 KIF5BP33176 963 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 RBM10P98175 930 aaKnown RBP9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 CHRNEQ04844 493 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 ZNF543Q08ER8 600 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 LAPTM5Q13571 262 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 PRSS53Q2L4Q9 553 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 ADCK5Q3MIX3 580 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 ARTNQ5T4W7 220 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 SYDE2Q5VT97 1194 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 WDR78Q5VTH9 848 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 PPIL6Q8IXY8 311 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 ANKS4BQ8N8V4 417 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 IGDCC4Q8TDY8 1250 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 NUP133Q8WUM0 1156 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 MAP6Q96JE9 813 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 LRRC2Q9BYS8 371 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 LY9Q9HBG7 655 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 ERVK13-1Q9NX77 482 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 RBPJLQ9UBG7 517 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 PNMA2Q9UL42 364 aa9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 NAP1L2Q9ULW6 460 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 MRPS23Q9Y3D9 190 aaKnown RBP9.24□□□□□ -0.93
TRAPPC12-221ENST00000489032 VWA5AO00534 786 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 SNHG28P0DPA3 235 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 STAT3P40763 770 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 KIR2DL1P43626 348 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 KIR2DL2P43627 348 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 GNAQP50148 359 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 OAZ1P54368 228 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 RTP1P59025 263 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 EXOSC10Q01780 885 aaKnown RBP9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 CACNB2Q08289 660 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 SQSTM1Q13501 440 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 TCEA2Q15560 299 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 FOXB2Q5VYV0 432 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 E4F1Q66K89 784 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 BTNL9Q6UXG8 535 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 RUFY3Q7L099 469 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 SGMS1Q86VZ5 419 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 SYNPOQ8N3V7 929 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 SOCS4Q8WXH5 440 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 BADQ92934 168 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 EXOC2Q96KP1 924 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 MAP3K14Q99558 947 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 LZTS2Q9BRK4 669 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 TEX13BQ9BXU2 312 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 SPATC1LQ9H0A9 340 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 SLKQ9H2G2 1235 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 MROH8Q9H579 483 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 TXNRD2Q9NNW7 524 aa9.23□□□□□ -0.93
TRAPPC12-221ENST00000489032 ADAMTS5Q9UNA0 930 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms