RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 KLRG2A4D1S0 409 aaPredicted RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 NPIPB8E9PQR5 432 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 CLSTN1O94985 981 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 XPAP23025 273 aaPredicted RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 CASRP41180 1078 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 TMPOP42166 694 aaKnown RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 NPEPPSP55786 919 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 SESN3P58005 492 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 IGBP1P78318 339 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 TMPRSS15P98073 1019 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 PTH1RQ03431 593 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 STAT4Q14765 748 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 UBE3CQ15386 1083 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 FSCN1Q16658 493 aaKnown RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 LMBR1LQ6UX01 489 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 ABHD15Q6UXT9 468 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 TAS1R1Q7RTX1 841 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 TMPRSS6Q8IU80 811 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 GLB1L2Q8IW92 636 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 FTSJ3Q8IY81 847 aaKnown RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 THEMISQ8N1K5 641 aaPredicted RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 ANKRD35Q8N283 1001 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 LILRA3Q8N6C8 439 aaPredicted RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 ARL8AQ96BM9 186 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 ZNF703Q9H7S9 590 aaPredicted RBP3.54□□□□□ -1.84
CALD1-221ENST00000489019 KCNG1Q9UIX4 513 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 MED14O60244 1454 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 IQSEC2Q5JU85 1478 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 NLRP1Q9C000 1473 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 CD163L1Q9NR16 1453 aa3.54□□□□□ -1.84
CALD1-221ENST00000489019 FAM135BQ49AJ0 1406 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 EDC4Q6P2E9 1401 aaKnown RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 KNDC1Q76NI1 1749 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 UBR1Q8IWV7 1749 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 PLEKHG1Q9ULL1 1385 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 XDHP47989 1333 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 CYP27B1O15528 508 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 HOXA3O43365 443 aaPredicted RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 NARSO43776 548 aaKnown RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 NRP2O60462 931 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 BRINP1O60477 761 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 FZD7O75084 574 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 SLPIP03973 132 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 HMOX1P09601 288 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 IBSPP21815 317 aaPredicted RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 ENPP1P22413 925 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 PRKAR2BP31323 418 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 PTTG1IPP53801 180 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 RARSP54136 660 aaKnown RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 NRG3P56975 720 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 ANAPC15P60006 121 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 SLC25A3Q00325 362 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 CALD1Q05682 793 aaKnown RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 EXOSC9Q06265 439 aaKnown RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 LMOD3Q0VAK6 560 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 CRHR2Q13324 411 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 UGT8Q16880 541 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 CT47A1Q5JQC4 288 aaPredicted RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 FNDC7Q5VTL7 733 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 ZKSCAN2Q63HK3 967 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 MFSD5Q6N075 450 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 HTR3DQ70Z44 454 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 KRT26Q7Z3Y9 468 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 ZFPM1Q8IX07 1006 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 MB21D1Q8N884 522 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 MDGA1Q8NFP4 955 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 TGFBRAP1Q8WUH2 860 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 LMBR1Q8WVP7 490 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 ATXN2LQ8WWM7 1075 aaKnown RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 RSAD2Q8WXG1 361 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 PGBD4Q96DM1 585 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 PLEKHF1Q96S99 279 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 ZNF341Q9BYN7 854 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 CSRNP2Q9H175 543 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 SMC4Q9NTJ3 1288 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 NOP58Q9Y2X3 529 aaKnown RBP3.53□□□□□ -1.84
CALD1-221ENST00000489019 HS3ST3A1Q9Y663 406 aa3.53□□□□□ -1.84
CALD1-221ENST00000489019 SETD1AO15047 1707 aaKnown RBP3.53□□□□□ -1.85
CALD1-221ENST00000489019 ITSN1Q15811 1721 aa3.53□□□□□ -1.85
CALD1-221ENST00000489019 NRXN3Q9Y4C0 1643 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 ACEP12821 1306 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 CDC42BPGQ6DT37 1551 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 NRP1O14786 923 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 IPO8O15397 1037 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 GPR39O43194 453 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 PRKD3O94806 890 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 LTA4HP09960 611 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 CT47B1P0C2W7 299 aaPredicted RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 HK1P19367 917 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 CTSSP25774 331 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 CNGA1P29973 690 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 MAN2A2P49641 1150 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 SCAND1P57086 179 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 DUSP2Q05923 314 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 KLF10Q13118 480 aa3.52□□□□□ -1.85
CALD1-221ENST00000489019 MRPL49Q13405 166 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 TOB2Q14106 344 aaPredicted RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 RRS1Q15050 365 aaKnown RBP3.52□□□□□ -1.85
CALD1-221ENST00000489019 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.52□□□□□ -1.85
CALD1-221ENST00000489019 LSM12Q3MHD2 195 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms