RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 GPD1LQ8N335 351 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 CCDC47Q96A33 483 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 SAMD11Q96NU1 681 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 GZF1Q9H116 711 aaPredicted RBP18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 NLRC5Q86WI3 1866 aa18.65■□□□□ 0.58
SHROOM1-205ENST00000488072 PPP1R3GB7ZBB8 358 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 ALDH2P05091 517 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 FOSL2P15408 326 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 GTF2F1P35269 517 aaKnown RBP eCLIP18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 ALDH7A1P49419 539 aaKnown RBP18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 PPP2R3AQ06190 1150 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 ZBTB6Q15916 424 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 ADGRD2Q7Z7M1 963 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 BRSK2Q8IWQ3 736 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 GUF1Q8N442 669 aaKnown RBP18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 CCDC34Q96HJ3 373 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 POP1Q99575 1024 aaKnown RBP18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 TMEM175Q9BSA9 504 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 C11orf84Q9BUA3 381 aaPredicted RBP18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 PLVAPQ9BX97 442 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 GPR62Q9BZJ7 368 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 NUP62CLQ9H1M0 184 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 AAASQ9NRG9 546 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 TOPORSQ9NS56 1045 aaPredicted RBP18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
SHROOM1-205ENST00000488072 TRIP11Q15643 1979 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 NR3C1P04150 777 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 BRCC3P46736 316 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 ZCWPW2Q504Y3 356 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 KLHL10Q6JEL2 608 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 ADSSL1Q8N142 457 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 P2RX5Q93086 422 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 DMAC2Q9NW81 257 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 RMND1Q9NWS8 449 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 RBAKQ9NYW8 714 aaPredicted RBP18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 HOOK1Q9UJC3 728 aaKnown RBP18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 RWDD3Q9Y3V2 267 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 MYO7AQ13402 2215 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 PLXNA4Q9HCM2 1894 aa18.63■□□□□ 0.57
SHROOM1-205ENST00000488072 HIDE1A8MVS5 230 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 PDXKO00764 312 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 STX17P56962 302 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 PLCB3Q01970 1234 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 HSP90AA2PQ14568 343 aaPredicted RBP18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 PLPP4Q5VZY2 271 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 ANKRD40Q6AI12 368 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 HS2ST1Q7LGA3 356 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 XXYLT1Q8NBI6 393 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 OR5B17Q8NGF7 314 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 ELMO3Q96BJ8 720 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 FBXL18Q96ME1 805 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 MED15Q96RN5 788 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 GAS2L1Q99501 681 aaPredicted RBP18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 PRDM6Q9NQX0 595 aa18.62■□□□□ 0.57
SHROOM1-205ENST00000488072 PODXLO00592 558 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 EXOC3O60645 756 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 EFEMP2O95967 443 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 RBM10P98175 930 aaKnown RBP18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 SNRNP35Q16560 246 aaKnown RBP18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 UPP1Q16831 310 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 C12orf56Q8IXR9 622 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 VPS52Q8N1B4 723 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 CCDC127Q96BQ5 260 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 TMEM169Q96HH4 297 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 PLEKHA5Q9HAU0 1116 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 TMEM63CQ9P1W3 806 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 CTNND2Q9UQB3 1225 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 TRAF3IP3Q9Y228 551 aa18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 PRRC2BQ5JSZ5 2229 aaKnown RBP18.61■□□□□ 0.57
SHROOM1-205ENST00000488072 ZNF233A6NK53 670 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 FSCN2O14926 492 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 PER2O15055 1255 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 AKAP3O75969 853 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 DLG4P78352 724 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 TFAMQ00059 246 aaKnown RBP18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 CYP24A1Q07973 514 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 TMEM132DQ14C87 1099 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 TCEAL5Q5H9L2 206 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 CEP135Q66GS9 1140 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 FUT10Q6P4F1 479 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 RBM23Q86U06 439 aaKnown RBP18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 MICAL1Q8TDZ2 1067 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 ZNF516Q92618 1163 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 MRPL38Q96DV4 380 aaKnown RBP18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 COLEC11Q9BWP8 271 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 RALGAPA2Q2PPJ7 1873 aa18.6■□□□□ 0.57
SHROOM1-205ENST00000488072 TDRD15B5MCY1 1934 aaKnown RBP18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 C2CD2LO14523 706 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 SPTLC1O15269 473 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 CALUO43852 315 aaPredicted RBP18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 TADA2AO75478 443 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 B3GAT3O94766 335 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 LDHAP00338 332 aaKnown RBP18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 NR2F2P24468 414 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 CA8P35219 290 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 KYAT1Q16773 422 aa18.59■□□□□ 0.57
SHROOM1-205ENST00000488072 SPATA1Q5VX52 437 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms