RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 SYCE3A1L190 88 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 AKAP3O75969 853 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 LINC00271P0C7V0 271 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 LAG3P18627 525 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 CYP3A5P20815 502 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 ALDH7A1P49419 539 aaKnown RBP14.44□□□□□ -0.1
COL4A6-207ENST00000487645 CASP4P49662 377 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 STX17P56962 302 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 TAP1Q03518 808 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 TUSC3Q13454 348 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 NAB2Q15742 525 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 USP37Q86T82 979 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 COLGALT2Q8IYK4 626 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 FAM186BQ8IYM0 893 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 CSGALNACT2Q8N6G5 542 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 TMC2Q8TDI7 906 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 CACTINQ8WUQ7 758 aaKnown RBP14.44□□□□□ -0.1
COL4A6-207ENST00000487645 TIFAQ96CG3 184 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 DDX27Q96GQ7 796 aaKnown RBP14.44□□□□□ -0.1
COL4A6-207ENST00000487645 MED15Q96RN5 788 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 TGS1Q96RS0 853 aaKnown RBP14.44□□□□□ -0.1
COL4A6-207ENST00000487645 FUCA2Q9BTY2 467 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 PLVAPQ9BX97 442 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 NAT10Q9H0A0 1025 aaKnown RBP14.44□□□□□ -0.1
COL4A6-207ENST00000487645 NKX2-4Q9H2Z4 354 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 PDE11AQ9HCR9 933 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 CHD7Q9P2D1 2997 aa14.44□□□□□ -0.1
COL4A6-207ENST00000487645 LAMA3Q16787 3333 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 TRANK1O15050 2925 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 TMEM265A0A087WTH1 108 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 IKBKBO14920 756 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 SLC16A3O15427 465 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 GNA14O95837 355 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 RB1P06400 928 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 GALTP07902 379 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 EPB41P11171 864 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 RPL9P32969 192 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 BMPR1AP36894 532 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 BCAR1P56945 870 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 ERVK-21P61565 698 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 CLDN10P78369 228 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 TMEM132DQ14C87 1099 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 SPOUT1Q5T280 376 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 SPATA1Q5VX52 437 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 JADE1Q6IE81 842 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 KCNT2Q6UVM3 1135 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 INTS8Q75QN2 995 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 BEST2Q8NFU1 509 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 ENOX1Q8TC92 643 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 PARD3BQ8TEW8 1205 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 BORCS6Q96GS4 357 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 UROC1Q96N76 676 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 ZNF558Q96NG5 402 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 FNBP1Q96RU3 617 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 SRRTQ9BXP5 876 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 METTL14Q9HCE5 456 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 UBQLN1Q9UMX0 589 aaKnown RBP14.43□□□□□ -0.1
COL4A6-207ENST00000487645 FAN1Q9Y2M0 1017 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 PCDHB12Q9Y5F1 795 aa14.43□□□□□ -0.1
COL4A6-207ENST00000487645 C5orf67F2Z3F1 127 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 ZC3H11AO75152 810 aaKnown RBP eCLIP14.42□□□□□ -0.1
COL4A6-207ENST00000487645 CAVIN2O95810 425 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 KRT13P13646 458 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 LRPAP1P30533 357 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 VAMP7P51809 220 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 AP3M2P53677 418 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 WNT7BP56706 349 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 SPAG1Q07617 926 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 TPD52L1Q16890 204 aaPredicted RBP14.42□□□□□ -0.1
COL4A6-207ENST00000487645 DUOXA2Q1HG44 320 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 HABP4Q5JVS0 413 aaKnown RBP14.42□□□□□ -0.1
COL4A6-207ENST00000487645 GLRA4Q5JXX5 417 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 PPP2R2DQ66LE6 453 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 GPR153Q6NV75 609 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 FRMD5Q7Z6J6 570 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 WDR49Q8IV35 697 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 COLGALT1Q8NBJ5 622 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 C18orf25Q96B23 403 aaPredicted RBP14.42□□□□□ -0.1
COL4A6-207ENST00000487645 CCDC127Q96BQ5 260 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 EEF2KMTQ96G04 330 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 BPIFA3Q9BQP9 254 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 COLEC11Q9BWP8 271 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 DNAJB4Q9UDY4 337 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 SCN1AP35498 2009 aa14.42□□□□□ -0.1
COL4A6-207ENST00000487645 NRP1O14786 923 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 ARHGEF15O94989 841 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 NFICP08651 508 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 PPM1AP35813 382 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 OR1G1P47890 313 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 SLC11A1P49279 550 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 MARSP56192 900 aaKnown RBP14.41□□□□□ -0.1
COL4A6-207ENST00000487645 SOX4Q06945 474 aaPredicted RBP14.41□□□□□ -0.1
COL4A6-207ENST00000487645 BFSP1Q12934 665 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 ANO6Q4KMQ2 910 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 DCLRE1AQ6PJP8 1040 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 C11orf57Q6ZUT1 292 aaPredicted RBP14.41□□□□□ -0.1
COL4A6-207ENST00000487645 EFCAB13Q8IY85 973 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 CGRRF1Q99675 332 aa14.41□□□□□ -0.1
COL4A6-207ENST00000487645 GZF1Q9H116 711 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms