RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SFR1Q86XK3 245 aa22.32■■□□□ 1.16
HDAC4-209ENST00000487617 GLYCTKQ8IVS8 523 aa22.32■■□□□ 1.16
HDAC4-209ENST00000487617 PDILTQ8N807 584 aa22.32■■□□□ 1.16
HDAC4-209ENST00000487617 DDX27Q96GQ7 796 aaKnown RBP22.32■■□□□ 1.16
HDAC4-209ENST00000487617 POMKQ9H5K3 350 aa22.32■■□□□ 1.16
HDAC4-209ENST00000487617 MAN1C1Q9NR34 630 aa22.32■■□□□ 1.16
HDAC4-209ENST00000487617 FNIP2Q9P278 1114 aa22.32■■□□□ 1.16
HDAC4-209ENST00000487617 TMEM189-UBE2V1I3L0A0 370 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 MEFVO15553 781 aaPredicted RBP22.31■■□□□ 1.16
HDAC4-209ENST00000487617 PIGRP01833 764 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 CLTAP09496 248 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 RPL17P18621 184 aaKnown RBP22.31■■□□□ 1.16
HDAC4-209ENST00000487617 SP100P23497 879 aaPredicted RBP22.31■■□□□ 1.16
HDAC4-209ENST00000487617 IGFBP6P24592 240 aaPredicted RBP22.31■■□□□ 1.16
HDAC4-209ENST00000487617 GTF2BQ00403 316 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 SLC10A6Q3KNW5 377 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 ZC2HC1CQ53FD0 456 aaPredicted RBP22.31■■□□□ 1.16
HDAC4-209ENST00000487617 ELMSAN1Q6PJG2 1045 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 PALB2Q86YC2 1186 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 DPP7Q9UHL4 492 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 MUTYHQ9UIF7 546 aa22.31■■□□□ 1.16
HDAC4-209ENST00000487617 CUTAO60888 179 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 CXCL8P10145 99 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 MYBP10242 640 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 KYAT1Q16773 422 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 TMEM31Q5JXX7 168 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 MAP4K3Q8IVH8 894 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 PIK3R5Q8WYR1 880 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 C18orf25Q96B23 403 aaPredicted RBP22.3■■□□□ 1.16
HDAC4-209ENST00000487617 DNAJC19Q96DA6 116 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 ST6GALNAC4Q9H4F1 302 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 TSHZ2Q9NRE2 1034 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 SEL1LQ9UBV2 794 aa22.3■■□□□ 1.16
HDAC4-209ENST00000487617 FAM86C2PA6NEL3 165 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 PODXLO00592 558 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 OGTO15294 1046 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 TRAPPC3O43617 180 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 SPATA31D3P0C874 917 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 GAP43P17677 238 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 PSMD5Q16401 504 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 CD300LGQ6UXG3 332 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.29■■□□□ 1.16
HDAC4-209ENST00000487617 SPATA31D4Q6ZUB0 917 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 ZNF720Q7Z2F6 126 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 GPR149Q86SP6 731 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 C3orf58Q8NDZ4 430 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 LNX1Q8TBB1 728 aaPredicted RBP22.29■■□□□ 1.16
HDAC4-209ENST00000487617 KCNG4Q8TDN1 519 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 MSTO1Q9BUK6 570 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 PLEKHA5Q9HAU0 1116 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 NR2E1Q9Y466 385 aa22.29■■□□□ 1.16
HDAC4-209ENST00000487617 TGM5O43548 720 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 IDEP14735 1019 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 FGFR3P22607 806 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 RPL9P32969 192 aaKnown RBP22.28■■□□□ 1.16
HDAC4-209ENST00000487617 TNFSF9P41273 254 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 BRCC3P46736 316 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 HERC4Q5GLZ8 1057 aaPredicted RBP22.28■■□□□ 1.16
HDAC4-209ENST00000487617 ZBTB41Q5SVQ8 909 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 ATL3Q6DD88 541 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 SLC39A4Q6P5W5 647 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 PDXDC1Q6P996 788 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 FEZF2Q8TBJ5 459 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 MRPL44Q9H9J2 332 aaKnown RBP22.28■■□□□ 1.16
HDAC4-209ENST00000487617 TBC1D7Q9P0N9 293 aa22.28■■□□□ 1.16
HDAC4-209ENST00000487617 A0A0B4J269 797 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 TTC26A0AVF1 554 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 ANKRD63C9JTQ0 380 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 I3L4J1 428 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 GPR37L1O60883 481 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 C1RP00736 705 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 PPP2R3AQ06190 1150 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 SPAG1Q07617 926 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 SHC4Q6S5L8 630 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 CMASQ8NFW8 434 aaPredicted RBP22.27■■□□□ 1.16
HDAC4-209ENST00000487617 HDAC7Q8WUI4 952 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 HVCN1Q96D96 273 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 CLSTN3Q9BQT9 956 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 PLEKHA4Q9H4M7 779 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 RPF1Q9H9Y2 349 aaKnown RBP22.27■■□□□ 1.16
HDAC4-209ENST00000487617 C11orf16Q9NQ32 467 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 CFAP45Q9UL16 551 aa22.27■■□□□ 1.16
HDAC4-209ENST00000487617 CCDC195A0A1B0GUA6 201 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 FAM189A1O60320 539 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 TKTP29401 623 aaKnown RBP22.26■■□□□ 1.15
HDAC4-209ENST00000487617 ME1P48163 572 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 DNM1Q05193 864 aaKnown RBP22.26■■□□□ 1.15
HDAC4-209ENST00000487617 ENOX2Q16206 610 aaKnown RBP22.26■■□□□ 1.15
HDAC4-209ENST00000487617 LILRA6Q6PI73 481 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 C15orf39Q6ZRI6 1047 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 KREMEN2Q8NCW0 462 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 STAMQ92783 540 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 DHX58Q96C10 678 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 KIF12Q96FN5 646 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 LRFN3Q9BTN0 628 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 PANK4Q9NVE7 773 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 TUBGCP4Q9UGJ1 667 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 NUB1Q9Y5A7 615 aa22.26■■□□□ 1.15
HDAC4-209ENST00000487617 LACTBL1A8MY62 500 aa22.25■■□□□ 1.15
HDAC4-209ENST00000487617 C2CD4DB7Z1M9 353 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms