RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 DERAQ9Y315 318 aa12.7□□□□□ -0.38
CLIP2-207ENST00000487447 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-207ENST00000487447 NT5C1B-RDH14C9J2C7 533 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLIP2-207ENST00000487447 SOX4Q06945 474 aaPredicted RBP12.69□□□□□ -0.38
CLIP2-207ENST00000487447 NFIL3Q16649 462 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 TIGD5Q53EQ6 642 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 PDE12Q6L8Q7 609 aaKnown RBP12.69□□□□□ -0.38
CLIP2-207ENST00000487447 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
CLIP2-207ENST00000487447 SLC9A9Q8IVB4 645 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 BRSK2Q8IWQ3 736 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 PAAF1Q9BRP4 392 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 GTPBP4Q9BZE4 634 aaKnown RBP12.69□□□□□ -0.38
CLIP2-207ENST00000487447 ZBP1Q9H171 429 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 ASB7Q9H672 318 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 TLR9Q9NR96 1032 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 SLC38A7Q9NVC3 462 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 RMND1Q9NWS8 449 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 FAN1Q9Y2M0 1017 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 IRAK3Q9Y616 596 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 TSC2P49815 1807 aa12.69□□□□□ -0.38
CLIP2-207ENST00000487447 VWA8A3KMH1 1905 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 PDXKO00764 312 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 EXTL3O43909 919 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 KIF20AO95235 890 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 SMC2O95347 1197 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 BMP1P13497 986 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 CYP3A5P20815 502 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 LRPAP1P30533 357 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 IRS1P35568 1242 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 OR1G1P47890 313 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 ACOT2P49753 483 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 KCNQ1P51787 676 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 ERVFC1P60507 584 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 KRT17Q04695 432 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 PPP2R3AQ06190 1150 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 MYBPC2Q14324 1141 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-207ENST00000487447 UPP1Q16831 310 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 ZCWPW2Q504Y3 356 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 ZNF658Q5TYW1 1059 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-207ENST00000487447 ARMCX5Q6P1M9 558 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 CD300LGQ6UXG3 332 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 HS2ST1Q7LGA3 356 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 NT5DC4Q86YG4 428 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 GPD1LQ8N335 351 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 GOLGA5Q8TBA6 731 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 HERC2P3Q9BVR0 1158 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 COLEC11Q9BWP8 271 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 NSUN3Q9H649 340 aaKnown RBP12.68□□□□□ -0.38
CLIP2-207ENST00000487447 RPF1Q9H9Y2 349 aaKnown RBP12.68□□□□□ -0.38
CLIP2-207ENST00000487447 KIAA1586Q9HCI6 787 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 DMAC2Q9NW81 257 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 PUF60Q9UHX1 559 aaKnown RBP12.68□□□□□ -0.38
CLIP2-207ENST00000487447 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 C2CD2Q9Y426 696 aa12.68□□□□□ -0.38
CLIP2-207ENST00000487447 LACTBL1A8MY62 500 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 F8W810 466 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 KIF4AO95239 1232 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 IL18RAPO95256 599 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 SOD2P04179 222 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 CTSAP10619 480 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
CLIP2-207ENST00000487447 SPATA1Q5VX52 437 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 NELFCDQ8IXH7 590 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 SMARCE1Q969G3 411 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 SAAL1Q96ER3 474 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
CLIP2-207ENST00000487447 FAM213AQ9BRX8 229 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 NGRNQ9NPE2 291 aaKnown RBP12.67□□□□□ -0.38
CLIP2-207ENST00000487447 CHST7Q9NS84 486 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 HSPBP1Q9NZL4 362 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 ADAM28Q9UKQ2 775 aa12.67□□□□□ -0.38
CLIP2-207ENST00000487447 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
CLIP2-207ENST00000487447 PRRC2BQ5JSZ5 2229 aaKnown RBP12.67□□□□□ -0.38
CLIP2-207ENST00000487447 CASTOR2A6NHX0 329 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 XPOTO43592 962 aaKnown RBP12.66□□□□□ -0.38
CLIP2-207ENST00000487447 LILRB3O75022 631 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 CLCNKBP51801 687 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 WNT7BP56706 349 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 MCCD1P59942 119 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-207ENST00000487447 FUT10Q6P4F1 479 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 DCLRE1AQ6PJP8 1040 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 EFCAB13Q8IY85 973 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 C3orf58Q8NDZ4 430 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 C18orf25Q96B23 403 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-207ENST00000487447 GOLGA2P5Q9HBQ8 144 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 RBAKQ9NYW8 714 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-207ENST00000487447 CACNG4Q9UBN1 327 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 MAN1B1Q9UKM7 699 aa12.66□□□□□ -0.38
CLIP2-207ENST00000487447 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-207ENST00000487447 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms