RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TNIP3Q96KP6 325 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 MYD88Q99836 296 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 DPYSL5Q9BPU6 564 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 SARS2Q9NP81 518 aaKnown RBP6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 DAAM1Q9Y4D1 1078 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 USP19O94966 1318 aa6.17□□□□□ -1.42
PRPF38A-203ENST00000487160 LAMC3Q9Y6N6 1575 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 A0A1W2PRX2 142 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 PMS2P1A4D2B8 440 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 PHGDHO43175 533 aaKnown RBP6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 TEX33O43247 280 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 PAX4O43316 350 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 CD1AP06126 327 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 SBK3P0C264 359 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 FTH1P19P0C7X4 201 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 PIK3CBP42338 1070 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 HTR3AP46098 478 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 ALDH5A1P51649 535 aaPredicted RBP6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 MORC3Q14149 939 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 KHDC1LQ5JSQ8 128 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 OTUD7BQ6GQQ9 843 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 BORAQ6PGQ7 559 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 SRLQ86TD4 932 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 FAM90A1Q86YD7 464 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 PLXDC1Q8IUK5 500 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 EXOC8Q8IYI6 725 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 GPR135Q8IZ08 494 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 SPICE1Q8N0Z3 855 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 SLC35B2Q8TB61 432 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 GJA10Q969M2 543 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 NEIL1Q96FI4 390 aaPredicted RBP6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 TCF25Q9BQ70 676 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 MRI1Q9BV20 369 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 LRRC27Q9C0I9 530 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 C11orf54Q9H0W9 315 aaPredicted RBP6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 EPC1Q9H2F5 836 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 MRPL46Q9H2W6 279 aaKnown RBP6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 MYH16Q9H6N6 1097 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 FNIP2Q9P278 1114 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 SLC23A1Q9UHI7 598 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 TAGLN3Q9UI15 199 aa6.16□□□□□ -1.42
PRPF38A-203ENST00000487160 ATAD2BQ9ULI0 1458 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 BAZ1AQ9NRL2 1556 aaPredicted RBP6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 SMARCA4P51532 1647 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 LOC102724159A0A0B4J2E5 919 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 CXorf49A8MYA2 514 aaPredicted RBP6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 GRM6O15303 877 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 HOXA3O43365 443 aaPredicted RBP6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 FRS3O43559 492 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 CDC14BO60729 498 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 AHSGP02765 367 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 ATP5JP18859 108 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 SLC7A1P30825 629 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 PPP2CBP62714 309 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 PPP2CAP67775 309 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 CREMQ03060 361 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 PTH1RQ03431 593 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 IFIT5Q13325 482 aaKnown RBP6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 PWP2Q15269 919 aaKnown RBP6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 VPS72Q15906 364 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 FAM214AQ32MH5 1076 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 C10orf62Q5T681 223 aaPredicted RBP6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 XP32Q5T750 250 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 GORABQ5T7V8 394 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 ANKS6Q68DC2 871 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 ARHGEF18Q6ZSZ5 1173 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 SEM1Q6ZVN7 128 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 CERS3Q8IU89 383 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 FAM186BQ8IYM0 893 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 BRIX1Q8TDN6 353 aaKnown RBP6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 PHKBQ93100 1093 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 ARL8AQ96BM9 186 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 ARPC5LQ9BPX5 153 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 NLRC4Q9NPP4 1024 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 CNNM1Q9NRU3 951 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 OAZ3Q9UMX2 235 aa6.15□□□□□ -1.42
PRPF38A-203ENST00000487160 TCRBV7S2A1N4TA0A589 114 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 RHPN2P1A8MT19 583 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 KIAA0391O15091 583 aaKnown RBP6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 NPR1P16066 1061 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 HDCP19113 662 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 CR2P20023 1033 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 TM4SF4P48230 202 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 PRIM2P49643 509 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 ATP2B3Q16720 1220 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 PABPC1LQ4VXU2 614 aaKnown RBP6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 DACT2Q5SW24 774 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 FAM111BQ6SJ93 734 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 TOGARAM2Q6ZUX3 1019 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 FRMD5Q7Z6J6 570 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 SKAP1Q86WV1 359 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 XYLT1Q86Y38 959 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 SMC5Q8IY18 1101 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 LGI4Q8N135 537 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 SYT8Q8NBV8 401 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 IL17RDQ8NFM7 739 aa6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 TNPO1Q92973 898 aaKnown RBP6.14□□□□□ -1.43
PRPF38A-203ENST00000487160 MRGPRX1Q96LB2 322 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms