RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 SLAIN2Q9P270 581 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 THEGQ9P2T0 379 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ZNF219Q9P2Y4 722 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 GTF3C4Q9UKN8 822 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 AGAP1Q9UPQ3 857 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 NFS1Q9Y697 457 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 MAD1L1Q9Y6D9 718 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SPEF2Q9C093 1822 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 CASQ2O14958 399 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ENTPD5O75356 428 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 TOM1L1O75674 476 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 TRPA1O75762 1119 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 CAMTA2O94983 1202 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 MYCLP12524 364 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 KRT4P19013 534 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ATP6V1C1P21283 382 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SLC1A1P43005 524 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 KCNQ4P56696 695 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 HIF1AQ16665 826 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 MDH1BQ5I0G3 518 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 FOXR2Q6PJQ5 311 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PASD1Q8IV76 773 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SLC26A7Q8TE54 656 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 INPP5DQ92835 1189 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 THTPAQ9BU02 230 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 RUSC1Q9BVN2 902 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 OSBPL8Q9BZF1 889 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PRM3Q9NNZ6 103 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 CHCHD3Q9NX63 227 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 NR2E1Q9Y466 385 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SCINQ9Y6U3 715 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 NKRFO15226 690 aaKnown RBP eCLIP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 EIF3DO15371 548 aaKnown RBP eCLIP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 STAM2O75886 525 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 KRT37O76014 449 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 UPP2O95045 317 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 SKIV2L2P42285 1042 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PEX3P56589 373 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 TRPC3Q13507 836 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 MAP7D1Q3KQU3 841 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 KRT39Q6A163 491 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 DNAJC24Q6P3W2 148 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 WDR75Q8IWA0 830 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 LNX1Q8TBB1 728 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ALG3Q92685 438 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 MTBPQ96DY7 904 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 ZNF317Q96PQ6 595 aaPredicted RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 KIAA1683Q9H0B3 1180 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PCYOX1Q9UHG3 505 aa8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 MTO1Q9Y2Z2 717 aaKnown RBP8.12□□□□□ -1.11
COL6A4P1-202ENST00000487147 PI4K2BG5E9Z4 385 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 H3BRJ5 948 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 TLR3O15455 904 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 NOL3O60936 208 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 RALAP11233 206 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 LIG4P49917 911 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 SPRED3Q2MJR0 410 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 SYDE2Q5VT97 1194 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 PADI6Q6TGC4 694 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 SCG3Q8WXD2 468 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 TMEM117Q9H0C3 514 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 AGPAT3Q9NRZ7 376 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 TMEM59LQ9UK28 342 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 H7C0C1 242 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 TBX3O15119 743 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 FGRP09769 529 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 BMP3P12645 472 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 ATP5OP48047 213 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 CASP5P51878 434 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 PRELPP51888 382 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 PSMC6P62333 389 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 KLRC3Q07444 240 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 RABGAP1LQ5R372 815 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 ARHGAP22Q7Z5H3 698 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 PCGF5Q86SE9 256 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 RFX6Q8HWS3 928 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 CPXCR1Q8N123 301 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 RBM46Q8TBY0 533 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 ZNF483Q8TF39 744 aaPredicted RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 ALKBH8Q96BT7 664 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 CCDC124Q96CT7 223 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 RIOX1Q9H6W3 641 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 MANSC1Q9H8J5 431 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 TAS2R14Q9NYV8 317 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 NINJ2Q9NZG7 142 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 MRPL11Q9Y3B7 192 aaKnown RBP8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 DPPA5A6NC42 116 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 MCF2LO15068 1137 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 MARCKSL1P49006 195 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 SLC34A1Q06495 639 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 RHPN2Q8IUC4 686 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 CD209Q9NNX6 404 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 KLHL11Q9NVR0 708 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 CRYBG1Q9Y4K1 1723 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 DISP2A7MBM2 1401 aa8.11□□□□□ -1.11
COL6A4P1-202ENST00000487147 MYO3BQ8WXR4 1341 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms